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M. domestica Gene: ERCC6L - ENSMODG00000010916 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000010916
NameERCC6L
Descriptionexcision repair cross-complementation group 6 like [Source:HGNC Symbol;Acc:HGNC:20794]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj20105, pich, rad26l
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.98e3
  • 3.98e3
81.64
  • 81.64
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.07e3
  • 4.07e3
81.20
  • 81.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.48e3
  • 4.48e3
  • 1.41e4
  • 1.60e4
79.33
  • 79.33
  • 34.78
  • 25.91
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.02e3
  • 7.02e3
67.59
  • 67.59
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.03e4
  • 1.03e4
  • 1.24e4
52.36
  • 52.36
  • 42.70
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.08e4
51.71
  • 51.71
  • 50.35
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
  • 1.13e4
  • 1.24e4
51.26
  • 51.26
  • 47.67
  • 42.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
  • 1.33e4
47.63
  • 47.63
  • 38.71
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
45.68
  • 45.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
  • 1.20e4
  • 1.30e4
45.28
  • 45.28
  • 44.44
  • 40.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
43.62
  • 43.62
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
43.05
  • 43.05
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
41.51
  • 41.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
  • 1.50e4
  • 1.52e4
37.10
  • 37.10
  • 30.91
  • 29.65
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
35.52
  • 35.52
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
34.99
  • 34.99
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.42e4
  • 1.42e4
34.62
  • 34.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
  • 1.50e4
33.94
  • 33.94
  • 30.71
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.50e4
  • 1.50e4
30.80
  • 30.80
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
29.90
  • 29.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species15 genesCompare expression
Mammalia15 species16 genesCompare expression
Amniota17 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000010916.

Cross-references

EnsemblENSMODG00000010916 (ERCC6L)
HGNCHGNC:20794 (ERCC6L)
Uniprot/SPTREMBLF7F5D7, F7F5D7_MONDO

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