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M. domestica Gene: CLCN6 - ENSMODG00000010962 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000010962
NameCLCN6
Descriptionchloride channel, voltage-sensitive 6 [Source:HGNC Symbol;Acc:HGNC:2024]
OrganismMonodelphis domestica (opossum)
Synonym(s)clc-6, kiaa0046
Orthologs(s)19 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.53e3
  • 3.53e3
83.71
  • 83.71
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
3.53e3
  • 3.53e3
  • 4.27e3
  • 6.11e3
83.71
  • 83.71
  • 80.28
  • 71.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
3.84e3
  • 3.84e3
  • 4.22e3
82.26
  • 82.26
  • 80.54
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.49e3
  • 7.49e3
65.41
  • 65.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.72e3
  • 7.72e3
  • 8.85e3
  • 9.33e3
64.36
  • 64.36
  • 59.17
  • 56.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.81e3
  • 7.81e3
  • 7.96e3
  • 8.16e3
63.96
  • 63.96
  • 63.26
  • 62.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.81e3
  • 7.81e3
63.96
  • 63.96
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.04e3
  • 8.04e3
62.87
  • 62.87
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.05e3
  • 8.05e3
  • 9.13e3
  • 9.40e3
62.84
  • 62.84
  • 57.88
  • 56.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.10e3
  • 8.10e3
  • 8.16e3
62.63
  • 62.63
  • 62.33
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.35e3
  • 8.35e3
61.43
  • 61.43
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.41e3
  • 8.41e3
61.16
  • 61.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.42e3
  • 8.42e3
  • 8.91e3
  • 9.01e3
61.12
  • 61.12
  • 58.86
  • 58.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.51e3
  • 8.51e3
  • 9.84e3
60.73
  • 60.73
  • 54.58
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
8.54e3
  • 8.54e3
60.56
  • 60.56
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.57e3
  • 8.57e3
  • 8.69e3
60.42
  • 60.42
  • 59.86
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.72e3
  • 8.72e3
59.77
  • 59.77
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
9.18e3
  • 9.18e3
57.63
  • 57.63
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.31e3
  • 9.31e3
57.00
  • 57.00
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.08e4
  • 1.08e4
50.30
  • 50.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000010962.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000010962.

Cross-references

EnsemblENSMODG00000010962 (CLCN6)
HGNCHGNC:2024 (CLCN6)
Uniprot/SPTREMBLF7BC48, F7BC48_MONDO

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