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M. domestica Gene: RPS4X - ENSMODG00000011070 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000011070
NameRPS4X
Description40S ribosomal protein S4, X isoform [Source:UniProtKB/Swiss-Prot;Acc:O62738]
OrganismMonodelphis domestica (opossum)
Orthologs(s)34 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
56.0
  • 56.0
99.75
  • 99.75
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
68.4
  • 68.4
  • 271
  • 422
99.69
  • 99.69
  • 98.76
  • 98.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
68.6
  • 68.6
  • 88.0
99.69
  • 99.69
  • 99.60
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
78.0
  • 78.0
  • 117
  • 243
99.64
  • 99.64
  • 99.46
  • 98.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
98.8
  • 98.8
99.55
  • 99.55
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
98.8
  • 98.8
  • 109
99.55
  • 99.55
  • 99.50
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
111
  • 111
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
129
  • 129
99.41
  • 99.41
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
139
  • 139
  • 286
99.36
  • 99.36
  • 98.68
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
148
  • 148
99.32
  • 99.32
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
153
  • 153
99.30
  • 99.30
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
171
  • 171
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
180
  • 180
  • 220
99.17
  • 99.17
  • 98.99
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
230
  • 230
98.94
  • 98.94
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
291
  • 291
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
292
  • 292
  • 411
  • 479
98.66
  • 98.66
  • 98.11
  • 97.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
314
  • 314
  • 449
  • 529
98.55
  • 98.55
  • 97.93
  • 97.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
581
  • 581
97.32
  • 97.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.21e3
  • 1.21e3
  • 1.31e3
  • 2.67e3
94.44
  • 94.44
  • 93.98
  • 87.70
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.44e3
  • 1.44e3
93.35
  • 93.35
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
2.45e3
  • 2.45e3
88.69
  • 88.69
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species21 genesCompare expression
Mammalia14 species22 genesCompare expression
Amniota16 species24 genesCompare expression
Tetrapoda17 species25 genesCompare expression
Euteleostomi18 species26 genesCompare expression
Bilateria25 species34 genesCompare expression

Orthology information comes from OMA : ENSMODG00000011070.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Theria1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000011070.

Cross-references

EnsemblENSMODG00000011070 (RPS4X)
EMBLAF051136
Uniprot/SWISSPROTO62738, RS4X_MONDO

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