M. domestica Gene: TRPV2 - ENSMODG00000011239 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000011239
NameTRPV2
Descriptiontransient receptor potential cation channel, subfamily V, member 2 [Source:HGNC Symbol;Acc:HGNC:18082]
OrganismMonodelphis domestica (opossum)
Synonym(s)vrl, vrl-1, vrl1
Orthologs(s)16 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0018241prime adult stage
854
  • 854
96.06
  • 96.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.06e3
  • 1.06e3
  • 1.40e3
  • 2.59e3
95.10
  • 95.10
  • 93.53
  • 88.03
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.78e3
  • 1.78e3
91.79
  • 91.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
4.61e3
  • 4.61e3
  • 6.71e3
  • 9.14e3
78.72
  • 78.72
  • 69.02
  • 57.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.85e3
  • 7.85e3
63.76
  • 63.76
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
8.11e3
  • 8.11e3
  • 1.07e4
62.57
  • 62.57
  • 50.81
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
9.05e3
  • 9.05e3
58.23
  • 58.23
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
9.59e3
  • 9.59e3
  • 9.66e3
  • 1.07e4
55.72
  • 55.72
  • 55.41
  • 50.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
51.12
  • 51.12
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
50.23
  • 50.23
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
  • 1.31e4
47.29
  • 47.29
  • 39.68
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.24e4
  • 1.31e4
46.00
  • 46.00
  • 42.77
  • 39.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
45.73
  • 45.73
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.21e4
  • 1.21e4
  • 1.30e4
44.12
  • 44.12
  • 39.89
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.22e4
  • 1.22e4
  • 1.25e4
43.52
  • 43.52
  • 42.35
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
  • 1.25e4
  • 1.42e4
42.26
  • 42.26
  • 42.10
  • 34.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
41.72
  • 41.72
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.38e4
  • 1.38e4
36.13
  • 36.13
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.44e4
  • 1.44e4
33.39
  • 33.39
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.47e4
  • 1.47e4
32.33
  • 32.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000011239.

Paralogs (same species)

Paralogy information comes from OMA : ENSMODG00000011239.

Cross-references

EnsemblENSMODG00000011239 (TRPV2)
HGNCHGNC:18082 (TRPV2)
Uniprot/SPTREMBLF6RMV4, F6RMV4_MONDO

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