M. domestica Gene: LCP1 - ENSMODG00000011413 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000011413
NameLCP1
Descriptionlymphocyte cytosolic protein 1 (L-plastin) [Source:HGNC Symbol;Acc:HGNC:6528]
OrganismMonodelphis domestica (opossum)
Synonym(s)cp64, l-plastin, lc64p, pls2
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
560
  • 560
97.42
  • 97.42
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
642
  • 642
97.04
  • 97.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
738
  • 738
  • 762
  • 938
96.60
  • 96.60
  • 96.49
  • 95.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
817
  • 817
96.23
  • 96.23
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.82e3
  • 1.82e3
  • 2.95e3
91.62
  • 91.62
  • 86.38
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.81e3
  • 2.81e3
87.04
  • 87.04
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.95e3
  • 2.95e3
  • 3.27e3
  • 3.44e3
86.38
  • 86.38
  • 84.93
  • 84.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.57e3
  • 3.57e3
83.51
  • 83.51
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.65e3
  • 4.65e3
  • 4.72e3
  • 5.24e3
78.54
  • 78.54
  • 78.19
  • 75.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.05e3
  • 6.05e3
72.06
  • 72.06
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
6.11e3
  • 6.11e3
  • 6.33e3
71.79
  • 71.79
  • 70.78
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.14e3
  • 6.14e3
  • 6.98e3
  • 7.56e3
71.66
  • 71.66
  • 67.77
  • 65.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.15e3
  • 7.15e3
67.01
  • 67.01
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.72e3
  • 7.72e3
64.36
  • 64.36
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.86e3
  • 7.86e3
63.72
  • 63.72
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.88e3
  • 7.88e3
  • 1.03e4
63.63
  • 63.63
  • 52.38
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.28e3
  • 8.28e3
61.76
  • 61.76
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
8.74e3
  • 8.74e3
  • 9.63e3
59.68
  • 59.68
  • 55.52
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.97e3
  • 8.97e3
  • 1.06e4
  • 1.11e4
58.61
  • 58.61
  • 51.23
  • 48.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
51.84
  • 51.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000011413.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000011413.

Cross-references

EnsemblENSMODG00000011413 (LCP1)
HGNCHGNC:6528 (LCP1)
Uniprot/SPTREMBLF6S548, F6S548_MONDO, K7E4K0, K7E4K0_MONDO

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