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M. domestica Gene: GCDH - ENSMODG00000011508 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000011508
NameGCDH
Descriptionglutaryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4189]
OrganismMonodelphis domestica (opossum)
Synonym(s)acad5
Orthologs(s)24 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
714
  • 714
  • 858
  • 890
96.71
  • 96.71
  • 96.05
  • 95.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
909
  • 909
  • 1.34e3
95.81
  • 95.81
  • 93.83
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
961
  • 961
  • 2.40e3
95.57
  • 95.57
  • 88.95
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.19e3
  • 1.19e3
  • 1.19e3
  • 1.32e3
94.52
  • 94.52
  • 94.49
  • 93.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.48e3
  • 1.48e3
93.18
  • 93.18
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.54e3
  • 1.54e3
92.91
  • 92.91
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.12e3
  • 2.12e3
90.22
  • 90.22
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.31e3
  • 2.31e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
2.52e3
  • 2.52e3
88.37
  • 88.37
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.76e3
  • 2.76e3
87.27
  • 87.27
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.06e3
  • 3.06e3
85.88
  • 85.88
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.28e3
  • 3.28e3
  • 6.65e3
  • 8.83e3
84.85
  • 84.85
  • 69.32
  • 59.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
3.72e3
  • 3.72e3
  • 6.43e3
82.81
  • 82.81
  • 70.34
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.48e3
  • 4.48e3
79.32
  • 79.32
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.85e3
  • 4.85e3
  • 6.98e3
77.61
  • 77.61
  • 67.79
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.00e3
  • 5.00e3
76.93
  • 76.93
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.08e3
  • 5.08e3
  • 5.50e3
  • 6.69e3
76.57
  • 76.57
  • 74.63
  • 69.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.24e3
  • 5.24e3
75.81
  • 75.81
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.77e3
  • 5.77e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.96e3
  • 6.96e3
  • 7.65e3
  • 8.09e3
67.87
  • 67.87
  • 64.67
  • 62.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.20e3
  • 7.20e3
66.76
  • 66.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression
Bilateria23 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000011508.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000011508.

Cross-references

EnsemblENSMODG00000011508 (GCDH)
HGNCHGNC:4189 (GCDH)
Uniprot/SPTREMBLF6V0X1, F6V0X1_MONDO

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