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M. domestica Gene: SYCE2 - ENSMODG00000011510 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000011510
NameSYCE2
Descriptionsynaptonemal complex central element protein 2 [Source:HGNC Symbol;Acc:HGNC:27411]
OrganismMonodelphis domestica (opossum)
Synonym(s)cesc1
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.03e3
  • 3.03e3
  • 3.72e3
  • 5.30e3
86.00
  • 86.00
  • 82.83
  • 75.52
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.40e3
  • 3.40e3
84.32
  • 84.32
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.86e3
  • 4.86e3
77.59
  • 77.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
34.50
  • 34.50
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.46e4
  • 1.46e4
32.81
  • 32.81
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.49e4
  • 1.49e4
31.38
  • 31.38
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
  • 1.65e4
  • 1.67e4
28.68
  • 28.68
  • 23.72
  • 23.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.58e4
  • 1.58e4
26.98
  • 26.98
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
26.60
  • 26.60
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.60e4
  • 1.60e4
26.28
  • 26.28
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 1.65e4
25.02
  • 25.02
  • 23.75
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
1.63e4
  • 1.63e4
24.80
  • 24.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda1 species1 geneCompare expression

Orthology information comes from OMA : ENSMODG00000011510.

Cross-references

EnsemblENSMODG00000011510 (SYCE2)
HGNCHGNC:27411 (SYCE2)
Uniprot/SPTREMBLF6UIW6, F6UIW6_MONDO

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