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M. domestica Gene: SLC4A1 - ENSMODG00000011613 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000011613
NameSLC4A1
Descriptionsolute carrier family 4 (anion exchanger), member 1 (Diego blood group) [Source:HGNC Symbol;Acc:HGNC:11027]
OrganismMonodelphis domestica (opossum)
Synonym(s)ae1, cd233, di, epb3, fr, rta1a, sw, wd, wr
Orthologs(s)21 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000104life cycle
105
  • 105
99.52
  • 99.52
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.82e3
  • 1.82e3
91.58
  • 91.58
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
2.31e3
  • 2.31e3
89.32
  • 89.32
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.04e3
  • 3.04e3
  • 3.49e3
85.97
  • 85.97
  • 83.89
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
4.00e3
  • 4.00e3
  • 6.42e3
81.52
  • 81.52
  • 70.37
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.51e3
  • 4.51e3
79.18
  • 79.18
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.05e3
  • 5.05e3
76.71
  • 76.71
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.83e3
  • 5.83e3
  • 1.42e4
  • 1.45e4
73.07
  • 73.07
  • 34.35
  • 32.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.01e3
  • 7.01e3
  • 9.05e3
67.63
  • 67.63
  • 58.21
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.02e3
  • 7.02e3
  • 9.03e3
  • 1.10e4
67.61
  • 67.61
  • 58.31
  • 49.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.43e3
  • 7.43e3
65.71
  • 65.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.29e3
  • 9.29e3
  • 9.57e3
  • 1.18e4
57.12
  • 57.12
  • 55.81
  • 45.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.08e4
  • 1.08e4
50.17
  • 50.17
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
49.56
  • 49.56
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
36.00
  • 36.00
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
30.09
  • 30.09
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
  • 1.66e4
28.70
  • 28.70
  • 23.30
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
  • 1.65e4
28.32
  • 28.32
  • 23.89
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.69e4
  • 1.69e4
22.21
  • 22.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSMODG00000011613.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000011613.

Cross-references

EnsemblENSMODG00000011613 (SLC4A1)
HGNCHGNC:11027 (SLC4A1)
Uniprot/SPTREMBLF6UGX9, F6UGX9_MONDO

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