M. domestica Gene: ZSWIM4 - ENSMODG00000011902 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000011902
NameZSWIM4
Descriptionzinc finger, SWIM-type containing 4 [Source:HGNC Symbol;Acc:HGNC:25704]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj12221
Orthologs(s)14 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.83e3
  • 3.83e3
82.32
  • 82.32
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.34e3
  • 4.34e3
79.98
  • 79.98
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
4.63e3
  • 4.63e3
  • 8.21e3
  • 8.70e3
78.64
  • 78.64
  • 62.12
  • 59.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.04e3
  • 5.04e3
76.75
  • 76.75
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.70e3
  • 5.70e3
  • 7.17e3
73.69
  • 73.69
  • 66.89
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
5.94e3
  • 5.94e3
  • 9.55e3
  • 1.05e4
72.58
  • 72.58
  • 55.89
  • 51.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.54e3
  • 6.54e3
69.82
  • 69.82
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
6.79e3
  • 6.79e3
  • 9.41e3
68.65
  • 68.65
  • 56.56
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
7.09e3
  • 7.09e3
67.26
  • 67.26
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.13e3
  • 7.13e3
  • 8.50e3
67.07
  • 67.07
  • 60.77
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.26e3
  • 8.26e3
61.89
  • 61.89
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.74e3
  • 8.74e3
59.63
  • 59.63
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
9.22e3
  • 9.22e3
57.42
  • 57.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
9.24e3
  • 9.24e3
  • 9.50e3
  • 9.98e3
57.37
  • 57.37
  • 56.13
  • 53.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
  • 1.22e4
53.40
  • 53.40
  • 43.69
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.03e4
  • 1.22e4
52.36
  • 52.36
  • 52.26
  • 43.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
50.41
  • 50.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
  • 1.16e4
  • 1.17e4
48.85
  • 48.85
  • 46.25
  • 45.83
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
48.68
  • 48.68
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
48.22
  • 48.22
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.13e4
  • 1.13e4
47.84
  • 47.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria11 species11 genesCompare expression
Mammalia12 species12 genesCompare expression
Amniota13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000011902.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000011902.

Cross-references

EnsemblENSMODG00000011902 (ZSWIM4)
HGNCHGNC:25704 (ZSWIM4)
Uniprot/SPTREMBLF7EGX5, F7EGX5_MONDO

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