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M. domestica Gene: TBX3 - ENSMODG00000012059 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012059
NameTBX3
DescriptionT-box 3 [Source:HGNC Symbol;Acc:HGNC:11602]
OrganismMonodelphis domestica (opossum)
Synonym(s)tbx3-iso, ums, xhl
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
2.56e3
  • 2.56e3
88.18
  • 88.18
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.66e3
  • 2.66e3
87.74
  • 87.74
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
87.70
  • 87.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.81e3
  • 2.81e3
  • 4.10e3
  • 7.36e3
87.04
  • 87.04
  • 81.10
  • 66.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.62e3
  • 3.62e3
  • 3.76e3
  • 5.97e3
83.31
  • 83.31
  • 82.65
  • 72.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.86e3
  • 3.86e3
82.19
  • 82.19
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.66e3
  • 4.66e3
  • 5.46e3
78.50
  • 78.50
  • 74.79
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
5.17e3
  • 5.17e3
76.15
  • 76.15
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
6.07e3
  • 6.07e3
  • 1.00e4
71.99
  • 71.99
  • 53.68
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.19e3
  • 6.19e3
  • 6.58e3
  • 6.59e3
71.43
  • 71.43
  • 69.60
  • 69.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.91e3
  • 6.91e3
68.10
  • 68.10
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.24e3
  • 7.24e3
  • 7.43e3
66.58
  • 66.58
  • 65.71
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.42e3
  • 7.42e3
  • 1.32e4
  • 1.36e4
65.75
  • 65.75
  • 39.05
  • 37.02
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
7.47e3
  • 7.47e3
65.53
  • 65.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.64e3
  • 7.64e3
  • 8.12e3
  • 9.47e3
64.71
  • 64.71
  • 62.52
  • 56.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.12e3
  • 8.12e3
62.50
  • 62.50
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.21e3
  • 8.21e3
62.09
  • 62.09
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
48.93
  • 48.93
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.13e4
  • 1.13e4
  • 1.34e4
47.71
  • 47.71
  • 38.22
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
43.76
  • 43.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000012059.

Cross-references

EnsemblENSMODG00000012059 (TBX3)
HGNCHGNC:11602 (TBX3)
Uniprot/SPTREMBLF7GF71, F7GF71_MONDO

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