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M. domestica Gene: GTF3C3 - ENSMODG00000012196 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012196
NameGTF3C3
Descriptiongeneral transcription factor IIIC subunit 3 [Source:HGNC Symbol;Acc:HGNC:4666]
OrganismMonodelphis domestica (opossum)
Synonym(s)tfiiic102, tfiiic2-102
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.75e3
  • 4.75e3
  • 5.13e3
78.06
  • 78.06
  • 76.31
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
5.02e3
  • 5.02e3
  • 6.65e3
76.82
  • 76.82
  • 69.29
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.03e3
  • 5.03e3
76.79
  • 76.79
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.40e3
  • 5.40e3
75.05
  • 75.05
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.79e3
  • 5.79e3
  • 7.29e3
  • 8.29e3
73.26
  • 73.26
  • 66.36
  • 61.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.07e3
  • 6.07e3
  • 6.99e3
  • 7.35e3
71.96
  • 71.96
  • 67.74
  • 66.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
6.47e3
  • 6.47e3
70.12
  • 70.12
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.06e3
  • 7.06e3
  • 7.62e3
  • 9.45e3
67.42
  • 67.42
  • 64.81
  • 56.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
7.24e3
  • 7.24e3
66.58
  • 66.58
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.50e3
  • 7.50e3
65.39
  • 65.39
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.57e3
  • 7.57e3
  • 8.43e3
65.06
  • 65.06
  • 61.10
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.95e3
  • 7.95e3
63.29
  • 63.29
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.98e3
  • 7.98e3
63.16
  • 63.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.06e3
  • 8.06e3
62.80
  • 62.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.12e3
  • 8.12e3
  • 8.35e3
  • 1.02e4
62.49
  • 62.49
  • 61.44
  • 52.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.33e3
  • 8.33e3
61.53
  • 61.53
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.35e3
  • 8.35e3
61.46
  • 61.46
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.57e3
  • 8.57e3
60.42
  • 60.42
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.70e3
  • 8.70e3
59.84
  • 59.84
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.82e3
  • 8.82e3
  • 8.86e3
  • 9.67e3
59.29
  • 59.29
  • 59.08
  • 55.34
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.67e3
  • 9.67e3
55.37
  • 55.37
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.68e3
  • 9.68e3
  • 9.83e3
55.29
  • 55.29
  • 54.61
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSMODG00000012196.

Cross-references

EnsemblENSMODG00000012196 (GTF3C3)
HGNCHGNC:4666 (GTF3C3)
Uniprot/SPTREMBLF6PPJ6, F6PPJ6_MONDO

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