M. domestica Gene: SLC38A3 - ENSMODG00000012273 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012273
NameSLC38A3
Descriptionsolute carrier family 38 member 3 [Source:HGNC Symbol;Acc:HGNC:18044]
OrganismMonodelphis domestica (opossum)
Synonym(s)g17, sn1
Orthologs(s)19 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
883
  • 883
  • 1.12e3
  • 1.47e3
95.93
  • 95.93
  • 94.82
  • 93.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.26e3
  • 1.26e3
  • 1.66e3
  • 2.48e3
94.20
  • 94.20
  • 92.33
  • 88.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
2.95e3
  • 2.95e3
  • 6.08e3
86.38
  • 86.38
  • 71.96
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.97e3
  • 3.97e3
81.67
  • 81.67
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.37e3
  • 4.37e3
79.82
  • 79.82
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.52e3
  • 4.52e3
  • 4.68e3
79.14
  • 79.14
  • 78.41
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
4.95e3
  • 4.95e3
  • 6.79e3
  • 1.18e4
77.14
  • 77.14
  • 68.64
  • 45.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.36e3
  • 7.36e3
66.01
  • 66.01
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.32e4
52.30
  • 52.30
  • 38.91
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.04e4
  • 1.04e4
52.06
  • 52.06
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.18e4
  • 1.18e4
45.59
  • 45.59
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
44.36
  • 44.36
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.22e4
  • 1.22e4
43.88
  • 43.88
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.30e4
  • 1.30e4
40.11
  • 40.11
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.30e4
  • 1.30e4
39.93
  • 39.93
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.35e4
  • 1.35e4
  • 1.48e4
  • 1.55e4
37.53
  • 37.53
  • 31.89
  • 28.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.68e4
  • 1.68e4
  • 1.69e4
  • 1.86e4
22.29
  • 22.29
  • 21.95
  • 14.34
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000012273.

Paralogs (same species)

Paralogy information comes from OMA : ENSMODG00000012273.

Cross-references

EnsemblENSMODG00000012273 (SLC38A3)
HGNCHGNC:18044 (SLC38A3)
Uniprot/SPTREMBLF6YG76, F6YG76_MONDO

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