M. domestica Gene: CCDC62 - ENSMODG00000012308 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012308
NameCCDC62
Descriptioncoiled-coil domain containing 62 [Source:HGNC Symbol;Acc:HGNC:30723]
OrganismMonodelphis domestica (opossum)
Synonym(s)ct109, erap75, flj40344, tsp-ny
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
843
  • 843
  • 1.32e3
  • 1.44e3
96.11
  • 96.11
  • 93.90
  • 93.36
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
861
  • 861
96.03
  • 96.03
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.42e3
  • 2.42e3
88.83
  • 88.83
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
9.35e3
  • 9.35e3
  • 1.13e4
56.84
  • 56.84
  • 47.74
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
53.14
  • 53.14
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.04e4
  • 1.04e4
  • 1.08e4
  • 1.19e4
52.13
  • 52.13
  • 50.29
  • 45.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.08e4
  • 1.08e4
50.10
  • 50.10
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
  • 1.13e4
  • 1.21e4
48.62
  • 48.62
  • 47.77
  • 44.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
47.76
  • 47.76
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.14e4
  • 1.14e4
47.41
  • 47.41
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.14e4
  • 1.14e4
  • 1.24e4
47.17
  • 47.17
  • 42.72
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
47.08
  • 47.08
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
  • 1.26e4
  • 1.27e4
46.86
  • 46.86
  • 41.98
  • 41.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
45.79
  • 45.79
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
45.23
  • 45.23
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.22e4
44.94
  • 44.94
  • 43.49
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
44.68
  • 44.68
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
43.79
  • 43.79
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
40.43
  • 40.43
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.30e4
  • 1.30e4
  • 1.48e4
39.76
  • 39.76
  • 31.52
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.40e4
38.21
  • 38.21
  • 35.54
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSMODG00000012308 (CCDC62)
HGNCHGNC:30723 (CCDC62)
Uniprot/SPTREMBLF7EIZ0, F7EIZ0_MONDO

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