M. domestica Gene: RAPGEF1 - ENSMODG00000012492 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012492
NameRAPGEF1
DescriptionRap guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4568]
OrganismMonodelphis domestica (opossum)
Synonym(s)c3g, grf2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.39e3
  • 3.39e3
  • 4.01e3
  • 4.74e3
84.38
  • 84.38
  • 81.50
  • 78.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
4.95e3
  • 4.95e3
77.14
  • 77.14
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.41e3
  • 5.41e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.80e3
  • 5.80e3
  • 6.65e3
73.22
  • 73.22
  • 69.32
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.60e3
  • 6.60e3
  • 7.82e3
  • 8.33e3
69.53
  • 69.53
  • 63.90
  • 61.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
6.73e3
  • 6.73e3
  • 8.46e3
68.95
  • 68.95
  • 60.95
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.94e3
  • 6.94e3
67.99
  • 67.99
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
7.04e3
  • 7.04e3
  • 8.34e3
  • 8.88e3
67.49
  • 67.49
  • 61.50
  • 59.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.32e3
  • 7.32e3
  • 9.29e3
66.21
  • 66.21
  • 57.12
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.47e3
  • 7.47e3
65.51
  • 65.51
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.70e3
  • 7.70e3
64.47
  • 64.47
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.96e3
  • 7.96e3
63.24
  • 63.24
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.53e3
  • 8.53e3
  • 9.67e3
  • 1.07e4
60.61
  • 60.61
  • 55.36
  • 50.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
9.18e3
  • 9.18e3
57.60
  • 57.60
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.78e3
  • 9.78e3
54.84
  • 54.84
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
9.79e3
  • 9.79e3
54.80
  • 54.80
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.01e4
  • 1.01e4
  • 1.08e4
53.45
  • 53.45
  • 50.36
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
  • 1.15e4
  • 1.29e4
49.28
  • 49.28
  • 47.07
  • 40.66
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.11e4
  • 1.11e4
48.88
  • 48.88
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.23e4
  • 1.23e4
43.06
  • 43.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000012492 (RAPGEF1)
HGNCHGNC:4568 (RAPGEF1)
Uniprot/SPTREMBLF6QKH4, F6QKH4_MONDO

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