M. domestica Gene: TTF1 - ENSMODG00000012538 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012538
NameTTF1
Descriptiontranscription termination factor, RNA polymerase I [Source:HGNC Symbol;Acc:HGNC:12397]
OrganismMonodelphis domestica (opossum)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.19e3
  • 3.19e3
85.29
  • 85.29
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
3.44e3
  • 3.44e3
84.13
  • 84.13
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.69e3
  • 4.69e3
78.37
  • 78.37
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.90e3
  • 4.90e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.50e3
  • 5.50e3
74.63
  • 74.63
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
5.61e3
  • 5.61e3
  • 8.64e3
  • 8.80e3
74.09
  • 74.09
  • 60.13
  • 59.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.51e3
  • 6.51e3
69.95
  • 69.95
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
6.58e3
  • 6.58e3
  • 7.33e3
  • 1.02e4
69.63
  • 69.63
  • 66.14
  • 53.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.68e3
  • 6.68e3
69.16
  • 69.16
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.72e3
  • 6.72e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.94e3
  • 6.94e3
  • 8.32e3
67.99
  • 67.99
  • 61.61
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.17e3
  • 7.17e3
  • 8.95e3
  • 1.03e4
66.91
  • 66.91
  • 58.69
  • 52.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.60e3
  • 7.60e3
  • 1.09e4
  • 1.23e4
64.94
  • 64.94
  • 49.59
  • 43.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
7.83e3
  • 7.83e3
  • 8.26e3
63.86
  • 63.86
  • 61.89
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
8.05e3
  • 8.05e3
62.83
  • 62.83
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.15e3
  • 8.15e3
62.36
  • 62.36
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.42e3
  • 8.42e3
  • 9.27e3
  • 1.22e4
61.12
  • 61.12
  • 57.19
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
9.04e3
  • 9.04e3
  • 9.42e3
58.26
  • 58.26
  • 56.51
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
9.14e3
  • 9.14e3
57.79
  • 57.79
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.40e3
  • 9.40e3
56.59
  • 56.59
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.08e4
  • 1.08e4
  • 1.17e4
50.29
  • 50.29
  • 46.12
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
49.95
  • 49.95
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
40.73
  • 40.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000012538 (TTF1)
HGNCHGNC:12397 (TTF1)
Uniprot/SPTREMBLF6PZ00, F6PZ00_MONDO

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