M. domestica Gene: LHX9 - ENSMODG00000012746 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012746
NameLHX9
DescriptionLIM homeobox 9 [Source:HGNC Symbol;Acc:HGNC:14222]
OrganismMonodelphis domestica (opossum)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.44e3
  • 2.44e3
88.74
  • 88.74
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.79e3
  • 3.79e3
82.50
  • 82.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.64e3
  • 9.64e3
  • 9.74e3
  • 1.64e4
55.51
  • 55.51
  • 55.04
  • 24.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
9.92e3
  • 9.92e3
  • 1.03e4
  • 1.15e4
54.22
  • 54.22
  • 52.32
  • 46.71
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
51.54
  • 51.54
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
  • 1.22e4
  • 1.24e4
46.86
  • 46.86
  • 43.77
  • 42.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
  • 1.48e4
41.94
  • 41.94
  • 31.62
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.32e4
  • 1.32e4
  • 1.58e4
38.92
  • 38.92
  • 26.93
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
38.79
  • 38.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.54e4
  • 1.54e4
  • 1.80e4
29.01
  • 29.01
  • 16.95
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
17.97
  • 17.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000012746.

Cross-references

EnsemblENSMODG00000012746 (LHX9)
HGNCHGNC:14222 (LHX9)
Uniprot/SPTREMBLF6T103, F6T103_MONDO

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