M. domestica Gene: TFEB - ENSMODG00000012916 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012916
NameTFEB
Descriptiontranscription factor EB [Source:HGNC Symbol;Acc:HGNC:11753]
OrganismMonodelphis domestica (opossum)
Synonym(s)bhlhe35, tcfeb
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
2.76e3
  • 2.76e3
  • 8.46e3
87.25
  • 87.25
  • 60.95
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.28e3
  • 3.28e3
  • 3.68e3
  • 4.72e3
84.86
  • 84.86
  • 83.00
  • 78.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.68e3
  • 3.68e3
83.03
  • 83.03
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.83e3
  • 3.83e3
82.30
  • 82.30
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.99e3
  • 3.99e3
  • 4.13e3
81.60
  • 81.60
  • 80.95
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.97e3
  • 4.97e3
77.08
  • 77.08
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
5.37e3
  • 5.37e3
  • 9.60e3
75.23
  • 75.23
  • 55.70
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
6.43e3
  • 6.43e3
70.34
  • 70.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.22e3
  • 7.22e3
  • 7.33e3
  • 9.06e3
66.66
  • 66.66
  • 66.17
  • 58.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.34e3
  • 7.34e3
66.12
  • 66.12
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.43e3
  • 7.43e3
65.70
  • 65.70
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
8.00e3
  • 8.00e3
63.05
  • 63.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
8.12e3
  • 8.12e3
  • 1.02e4
  • 1.23e4
62.51
  • 62.51
  • 53.03
  • 43.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
  • 1.12e4
  • 1.25e4
52.27
  • 52.27
  • 48.15
  • 42.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.09e4
  • 1.09e4
49.87
  • 49.87
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.19e4
  • 1.19e4
  • 1.20e4
45.09
  • 45.09
  • 44.50
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
40.73
  • 40.73
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
40.70
  • 40.70
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
37.09
  • 37.09
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.47e4
  • 1.47e4
31.97
  • 31.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
  • 1.54e4
  • 1.61e4
31.79
  • 31.79
  • 29.10
  • 25.50
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Mammalia15 species15 genesCompare expression
Amniota17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000012916.

Cross-references

EnsemblENSMODG00000012916 (TFEB)
HGNCHGNC:11753 (TFEB)
Uniprot/SPTREMBLF7GCE6, F7GCE6_MONDO

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