M. domestica Gene: AMT - ENSMODG00000012973 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000012973
NameAMT
Descriptionaminomethyltransferase [Source:HGNC Symbol;Acc:HGNC:473]
OrganismMonodelphis domestica (opossum)
Synonym(s)gcst, nkh
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.64e3
  • 1.64e3
  • 2.19e3
92.41
  • 92.41
  • 89.90
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
2.45e3
  • 2.45e3
  • 2.55e3
  • 2.58e3
88.67
  • 88.67
  • 88.24
  • 88.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
3.40e3
  • 3.40e3
84.29
  • 84.29
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.25e3
  • 4.25e3
  • 5.75e3
  • 9.27e3
80.40
  • 80.40
  • 73.48
  • 57.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.62e3
  • 4.62e3
78.67
  • 78.67
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.13e3
  • 5.13e3
76.30
  • 76.30
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.51e3
  • 5.51e3
74.57
  • 74.57
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
5.58e3
  • 5.58e3
  • 6.99e3
74.24
  • 74.24
  • 67.73
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.35e3
  • 7.35e3
  • 8.37e3
66.09
  • 66.09
  • 61.37
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.59e3
  • 7.59e3
  • 1.06e4
  • 1.39e4
64.94
  • 64.94
  • 50.95
  • 35.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.85e3
  • 7.85e3
63.74
  • 63.74
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.20e3
  • 8.20e3
62.16
  • 62.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.84e3
  • 8.84e3
59.19
  • 59.19
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.98e3
  • 8.98e3
  • 9.20e3
  • 1.02e4
58.56
  • 58.56
  • 57.53
  • 53.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.14e3
  • 9.14e3
  • 9.84e3
  • 1.02e4
57.79
  • 57.79
  • 54.56
  • 52.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
9.35e3
  • 9.35e3
56.83
  • 56.83
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.03e4
  • 1.03e4
  • 1.09e4
52.66
  • 52.66
  • 49.69
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
44.76
  • 44.76
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
42.55
  • 42.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000012973.

Cross-references

EnsemblENSMODG00000012973 (AMT)
HGNCHGNC:473 (AMT)
Uniprot/SPTREMBLF7DB90, F7DB90_MONDO

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