M. domestica Gene: ACTN4 - ENSMODG00000013370 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000013370
NameACTN4
Descriptionactinin, alpha 4 [Source:HGNC Symbol;Acc:HGNC:166]
OrganismMonodelphis domestica (opossum)
Synonym(s)fsgs1
Orthologs(s)22 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
980
  • 980
  • 1.36e3
95.48
  • 95.48
  • 93.75
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.06e3
  • 1.06e3
95.09
  • 95.09
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.19e3
  • 1.19e3
  • 1.70e3
  • 2.30e3
94.51
  • 94.51
  • 92.15
  • 89.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.33e3
  • 1.33e3
93.86
  • 93.86
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.54e3
  • 1.54e3
92.90
  • 92.90
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.58e3
  • 1.58e3
  • 1.65e3
92.71
  • 92.71
  • 92.39
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.58e3
  • 1.58e3
92.71
  • 92.71
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.80e3
  • 1.80e3
  • 1.95e3
91.68
  • 91.68
  • 91.01
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.90e3
  • 1.90e3
91.24
  • 91.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.36e3
  • 2.36e3
  • 2.53e3
  • 3.10e3
89.11
  • 89.11
  • 88.34
  • 85.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.42e3
  • 2.42e3
  • 3.14e3
  • 3.90e3
88.82
  • 88.82
  • 85.52
  • 81.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.61e3
  • 2.61e3
87.95
  • 87.95
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.76e3
  • 2.76e3
87.27
  • 87.27
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.80e3
  • 2.80e3
87.09
  • 87.09
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.22e3
  • 3.22e3
85.12
  • 85.12
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.36e3
  • 3.36e3
  • 4.02e3
  • 5.05e3
84.48
  • 84.48
  • 81.43
  • 76.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
3.93e3
  • 3.93e3
  • 3.97e3
81.87
  • 81.87
  • 81.69
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.09e3
  • 4.09e3
  • 4.11e3
  • 5.30e3
81.14
  • 81.14
  • 81.01
  • 75.54
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.17e3
  • 4.17e3
80.74
  • 80.74
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.94e3
  • 4.94e3
77.18
  • 77.18
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.10e3
  • 5.10e3
76.45
  • 76.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSMODG00000013370.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000013370.

Cross-references

EnsemblENSMODG00000013370 (ACTN4)
HGNCHGNC:166 (ACTN4)
Uniprot/SPTREMBLF7DTH8, F7DTH8_MONDO

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