M. domestica Gene: SCN5A - ENSMODG00000013384 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000013384
NameSCN5A
Descriptionsodium channel, voltage gated, type V alpha subunit [Source:HGNC Symbol;Acc:HGNC:10593]
OrganismMonodelphis domestica (opossum)
Synonym(s)cdcd2, cmd1e, cmpd2, hb1, hb2, hbbd, hh1, iccd, ivf, lqt3, nav1.5, pfhb1, sss1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.10e3
  • 1.10e3
  • 1.85e3
94.66919
  • 94.66919
  • 91.00518
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
  • 1.51e4
30.32704
  • 30.32704
  • 26.41349
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.52e4
  • 1.52e4
  • 1.57e4
26.10735
  • 26.10735
  • 23.92060
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
25.93192
  • 25.93192
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
23.94601
  • 23.94601
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.66e4
  • 1.66e4
  • 1.73e4
19.36244
  • 19.36244
  • 15.73730
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000013384 (SCN5A)
HGNCHGNC:10593 (SCN5A)
Uniprot/SPTREMBLF7D8R6, F7D8R6_MONDO

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