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M. domestica Gene: SRPK1 - ENSMODG00000013740 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000013740
NameSRPK1
DescriptionSRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
OrganismMonodelphis domestica (opossum)
Synonym(s)sfrsk1
Orthologs(s)19 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.81e3
  • 1.81e3
91.64
  • 91.64
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.07e3
  • 2.07e3
  • 5.82e3
  • 7.38e3
90.46
  • 90.46
  • 73.13
  • 65.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.67e3
  • 2.67e3
87.67
  • 87.67
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.96e3
  • 2.96e3
86.33
  • 86.33
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
3.14e3
  • 3.14e3
  • 4.13e3
  • 5.39e3
85.52
  • 85.52
  • 80.96
  • 75.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
3.18e3
  • 3.18e3
85.30
  • 85.30
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.43e3
  • 3.43e3
  • 3.44e3
84.19
  • 84.19
  • 84.10
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.73e3
  • 3.73e3
  • 4.36e3
  • 5.20e3
82.79
  • 82.79
  • 79.86
  • 75.99
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
3.87e3
  • 3.87e3
82.15
  • 82.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.29e3
  • 4.29e3
  • 5.00e3
  • 5.27e3
80.22
  • 80.22
  • 76.90
  • 75.70
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.35e3
  • 4.35e3
79.94
  • 79.94
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
5.52e3
  • 5.52e3
  • 6.29e3
74.51
  • 74.51
  • 70.96
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
6.01e3
  • 6.01e3
72.27
  • 72.27
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.50e3
  • 6.50e3
69.98
  • 69.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.62e3
  • 6.62e3
69.43
  • 69.43
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.66e3
  • 6.66e3
  • 7.16e3
  • 9.05e3
69.27
  • 69.27
  • 66.94
  • 58.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
6.76e3
  • 6.76e3
  • 8.55e3
68.80
  • 68.80
  • 60.55
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.09e3
  • 7.09e3
  • 7.44e3
67.28
  • 67.28
  • 65.67
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.00e3
  • 8.00e3
63.05
  • 63.05
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
8.02e3
  • 8.02e3
62.96
  • 62.96
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.19e3
  • 8.19e3
62.20
  • 62.20
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species16 genesCompare expression
Mammalia15 species17 genesCompare expression
Amniota17 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000013740.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000013740.

Cross-references

EnsemblENSMODG00000013740 (SRPK1)
HGNCHGNC:11305 (SRPK1)
Uniprot/SPTREMBLF6X887, F6X887_MONDO

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