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M. domestica Gene: LIMK1 - ENSMODG00000013846 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000013846
NameLIMK1
DescriptionLIM domain kinase 1 [Source:HGNC Symbol;Acc:HGNC:6613]
OrganismMonodelphis domestica (opossum)
Synonym(s)limk
Orthologs(s)18 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.03e3
  • 2.03e3
90.65
  • 90.65
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.71e3
  • 2.71e3
  • 3.84e3
  • 4.80e3
87.51
  • 87.51
  • 82.28
  • 77.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
3.19e3
  • 3.19e3
  • 5.35e3
85.28
  • 85.28
  • 75.31
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.59e3
  • 5.59e3
74.20
  • 74.20
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.87e3
  • 5.87e3
72.91
  • 72.91
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
6.74e3
  • 6.74e3
  • 9.01e3
  • 1.16e4
68.88
  • 68.88
  • 58.41
  • 46.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.62e3
  • 7.62e3
64.81
  • 64.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.24e3
  • 9.24e3
  • 1.05e4
  • 1.12e4
57.34
  • 57.34
  • 51.65
  • 48.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
  • 1.05e4
  • 1.17e4
53.86
  • 53.86
  • 51.51
  • 45.78
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
53.26
  • 53.26
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.15e4
48.15
  • 48.15
  • 46.96
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.27e4
  • 1.41e4
45.45
  • 45.45
  • 41.38
  • 35.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
43.03
  • 43.03
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
  • 1.29e4
41.89
  • 41.89
  • 40.46
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
40.30
  • 40.30
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
40.24
  • 40.24
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.32e4
  • 1.32e4
  • 1.41e4
38.87
  • 38.87
  • 34.80
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
38.40
  • 38.40
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
36.66
  • 36.66
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
36.04
  • 36.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000013846.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000013846.

Cross-references

EnsemblENSMODG00000013846 (LIMK1)
HGNCHGNC:6613 (LIMK1)
Uniprot/SPTREMBLF6X673, F6X673_MONDO

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