M. domestica Gene: FAM180A - ENSMODG00000013978 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000013978
NameFAM180A
Descriptionfamily with sequence similarity 180 member A [Source:HGNC Symbol;Acc:HGNC:33773]
OrganismMonodelphis domestica (opossum)
Synonym(s)hwkm1940, unq1940
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.38e3
  • 5.38e3
  • 9.99e3
  • 1.10e4
75.17
  • 75.17
  • 53.89
  • 49.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
  • 1.58e4
  • 1.66e4
34.65
  • 34.65
  • 27.06
  • 23.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
1.45e4
  • 1.45e4
32.93
  • 32.93
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.51e4
  • 1.51e4
30.36
  • 30.36
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.61e4
  • 1.61e4
25.73
  • 25.73
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
  • 1.69e4
23.36
  • 23.36
  • 22.19
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.67e4
  • 1.67e4
  • 1.82e4
22.98
  • 22.98
  • 15.94
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000013978.

Cross-references

EnsemblENSMODG00000013978 (FAM180A)
HGNCHGNC:33773 (FAM180A)
Uniprot/SPTREMBLF6R607, F6R607_MONDO

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