M. domestica Gene: SETD6 - ENSMODG00000014173 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000014173
NameSETD6
DescriptionSET domain containing 6 [Source:HGNC Symbol;Acc:HGNC:26116]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj21148

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.84e3
  • 1.84e3
91.52
  • 91.52
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.04e3
  • 2.04e3
  • 3.64e3
90.59
  • 90.59
  • 83.22
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.41e3
  • 3.41e3
84.25
  • 84.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.29e3
  • 4.29e3
  • 4.73e3
  • 4.92e3
80.22
  • 80.22
  • 78.15
  • 77.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.76e3
  • 4.76e3
  • 4.82e3
78.03
  • 78.03
  • 77.76
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.45e3
  • 5.45e3
74.84
  • 74.84
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.55e3
  • 5.55e3
74.40
  • 74.40
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
5.81e3
  • 5.81e3
  • 6.14e3
  • 8.91e3
73.18
  • 73.18
  • 71.65
  • 58.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.99e3
  • 5.99e3
72.37
  • 72.37
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.17e3
  • 6.17e3
  • 7.07e3
  • 7.75e3
71.53
  • 71.53
  • 67.38
  • 64.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
6.24e3
  • 6.24e3
71.18
  • 71.18
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
6.33e3
  • 6.33e3
  • 7.93e3
70.79
  • 70.79
  • 63.37
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.62e3
  • 6.62e3
69.45
  • 69.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
7.12e3
  • 7.12e3
  • 7.63e3
  • 8.05e3
67.13
  • 67.13
  • 64.78
  • 62.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
7.35e3
  • 7.35e3
66.09
  • 66.09
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
7.76e3
  • 7.76e3
64.19
  • 64.19
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.96e3
  • 7.96e3
  • 8.19e3
63.24
  • 63.24
  • 62.19
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
9.07e3
  • 9.07e3
58.13
  • 58.13
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.01e4
  • 1.01e4
  • 1.08e4
  • 1.27e4
53.17
  • 53.17
  • 50.11
  • 41.30
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
46.10
  • 46.10
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
43.89
  • 43.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000014173 (SETD6)
HGNCHGNC:26116 (SETD6)
Uniprot/SPTREMBLF6U7C1, F6U7C1_MONDO

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