M. domestica Gene: CHCHD3 - ENSMODG00000014416 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000014416
NameCHCHD3
Descriptioncoiled-coil-helix-coiled-coil-helix domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21906]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj20420, mic19, minos3, ppp1r22
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
527
  • 527
97.57
  • 97.57
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
650
  • 650
  • 704
  • 754
97.00
  • 97.00
  • 96.75
  • 96.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.52e3
  • 1.52e3
92.98
  • 92.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.66e3
  • 1.66e3
92.35
  • 92.35
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.68e3
  • 1.68e3
92.24
  • 92.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.89e3
  • 1.89e3
  • 2.25e3
  • 2.48e3
91.29
  • 91.29
  • 89.62
  • 88.55
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.90e3
  • 1.90e3
  • 2.54e3
91.22
  • 91.22
  • 88.26
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.91e3
  • 1.91e3
91.20
  • 91.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.92e3
  • 1.92e3
  • 3.03e3
  • 4.15e3
91.15
  • 91.15
  • 86.02
  • 80.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.92e3
  • 1.92e3
  • 3.58e3
91.14
  • 91.14
  • 83.48
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.10e3
  • 2.10e3
  • 2.48e3
90.29
  • 90.29
  • 88.57
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.21e3
  • 2.21e3
89.81
  • 89.81
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.39e3
  • 2.39e3
88.97
  • 88.97
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.47e3
  • 2.47e3
88.60
  • 88.60
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.11e3
  • 3.11e3
  • 3.11e3
85.66
  • 85.66
  • 85.63
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.66e3
  • 3.66e3
83.13
  • 83.13
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
3.95e3
  • 3.95e3
  • 4.40e3
  • 5.10e3
81.78
  • 81.78
  • 79.71
  • 76.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
4.50e3
  • 4.50e3
  • 4.98e3
  • 5.26e3
79.22
  • 79.22
  • 77.03
  • 75.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.52e3
  • 4.52e3
79.12
  • 79.12
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.61e3
  • 4.61e3
78.72
  • 78.72
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.72e3
  • 4.72e3
78.21
  • 78.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species15 genesCompare expression
Mammalia14 species16 genesCompare expression
Amniota15 species17 genesCompare expression
Tetrapoda16 species18 genesCompare expression
Euteleostomi17 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000014416.

Cross-references

EnsemblENSMODG00000014416 (CHCHD3)
HGNCHGNC:21906 (CHCHD3)
Uniprot/SPTREMBLF7BHA5, F7BHA5_MONDO

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