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M. domestica Gene: FAM46B - ENSMODG00000014427 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000014427
NameFAM46B
Descriptionfamily with sequence similarity 46 member B [Source:HGNC Symbol;Acc:HGNC:28273]
OrganismMonodelphis domestica (opossum)
Synonym(s)mgc16491
Orthologs(s)15 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
976
  • 976
  • 1.48e3
  • 1.88e3
95.50
  • 95.50
  • 93.17
  • 91.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.67e3
  • 1.67e3
  • 3.78e3
  • 4.80e3
92.31
  • 92.31
  • 82.56
  • 77.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.28e3
  • 2.28e3
89.48
  • 89.48
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.63e3
  • 2.63e3
  • 5.49e3
87.88
  • 87.88
  • 74.66
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.65e3
  • 2.65e3
87.75
  • 87.75
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
2.76e3
  • 2.76e3
87.28
  • 87.28
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
4.10e3
  • 4.10e3
81.06
  • 81.06
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
5.35e3
  • 5.35e3
  • 6.47e3
75.29
  • 75.29
  • 70.15
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.70e3
  • 5.70e3
73.70
  • 73.70
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
5.72e3
  • 5.72e3
  • 9.48e3
  • 1.10e4
73.61
  • 73.61
  • 56.22
  • 49.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.53e3
  • 9.53e3
  • 1.26e4
55.99
  • 55.99
  • 41.77
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.08e4
  • 1.08e4
50.16
  • 50.16
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
44.27
  • 44.27
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.28e4
  • 1.28e4
  • 1.53e4
  • 1.65e4
41.10
  • 41.10
  • 29.50
  • 23.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
38.57
  • 38.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
38.09
  • 38.09
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.49e4
  • 1.49e4
31.21
  • 31.21
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
28.88
  • 28.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Tetrapoda14 species14 genesCompare expression
Bilateria15 species15 genesCompare expression

Orthology information comes from OMA : ENSMODG00000014427.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000014427.

Cross-references

EnsemblENSMODG00000014427 (FAM46B)
HGNCHGNC:28273 (FAM46B)
Uniprot/SPTREMBLF7BGH7, F7BGH7_MONDO

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