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M. domestica Gene: C11orf1 - ENSMODG00000014459 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000014459
NameC11orf1
Descriptionchromosome 11 open reading frame 1 [Source:HGNC Symbol;Acc:HGNC:1163]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj23499
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.47e3
  • 1.47e3
93.23
  • 93.23
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.88e3
  • 1.88e3
  • 3.71e3
  • 5.73e3
91.33
  • 91.33
  • 82.87
  • 73.55
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
2.08e3
  • 2.08e3
90.39
  • 90.39
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
7.66e3
  • 7.66e3
  • 8.86e3
  • 9.59e3
64.65
  • 64.65
  • 59.09
  • 55.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.39e3
  • 8.39e3
61.29
  • 61.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.46e3
  • 8.46e3
  • 1.11e4
  • 1.13e4
60.96
  • 60.96
  • 48.56
  • 47.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.92e3
  • 8.92e3
58.82
  • 58.82
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
9.42e3
  • 9.42e3
  • 1.20e4
56.51
  • 56.51
  • 44.50
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
9.45e3
  • 9.45e3
  • 1.35e4
  • 1.47e4
56.36
  • 56.36
  • 37.47
  • 32.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
9.49e3
  • 9.49e3
  • 9.75e3
56.20
  • 56.20
  • 54.98
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.66e3
  • 9.66e3
55.42
  • 55.42
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
9.87e3
  • 9.87e3
  • 1.09e4
54.44
  • 54.44
  • 49.62
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.91e3
  • 9.91e3
54.23
  • 54.23
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
52.30
  • 52.30
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
51.71
  • 51.71
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
  • 1.09e4
51.04
  • 51.04
  • 49.77
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
50.72
  • 50.72
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.09e4
  • 1.09e4
  • 1.16e4
  • 1.49e4
49.77
  • 49.77
  • 46.62
  • 31.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
48.83
  • 48.83
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.16e4
  • 1.16e4
46.36
  • 46.36
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.25e4
  • 1.25e4
42.07
  • 42.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species13 genesCompare expression
Amniota14 species15 genesCompare expression
Euteleostomi15 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000014459.

Cross-references

EnsemblENSMODG00000014459 (C11orf1)
HGNCHGNC:1163 (C11orf1)
Uniprot/SPTREMBLF7A623, F7A623_MONDO

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