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M. domestica Gene: SMO - ENSMODG00000014680 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000014680
NameSMO
Descriptionsmoothened, frizzled class receptor [Source:HGNC Symbol;Acc:HGNC:11119]
OrganismMonodelphis domestica (opossum)
Synonym(s)fzd11, smoh
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.08e3
  • 1.08e3
95.03
  • 95.03
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.25e3
  • 1.25e3
94.24
  • 94.24
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.53e3
  • 1.53e3
  • 1.13e4
  • 1.17e4
92.96
  • 92.96
  • 47.88
  • 46.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.57e3
  • 2.57e3
  • 3.23e3
  • 3.26e3
88.14
  • 88.14
  • 85.08
  • 84.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.24e3
  • 3.24e3
85.04
  • 85.04
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
3.84e3
  • 3.84e3
82.27
  • 82.27
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.27e3
  • 4.27e3
  • 4.38e3
80.27
  • 80.27
  • 79.78
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.27e3
  • 6.27e3
  • 6.74e3
71.06
  • 71.06
  • 68.87
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.42e3
  • 6.42e3
70.39
  • 70.39
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
6.66e3
  • 6.66e3
  • 7.22e3
69.25
  • 69.25
  • 66.68
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
7.28e3
  • 7.28e3
  • 7.40e3
  • 8.97e3
66.38
  • 66.38
  • 65.83
  • 58.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.56e3
  • 7.56e3
65.11
  • 65.11
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
8.07e3
  • 8.07e3
  • 1.01e4
62.77
  • 62.77
  • 53.52
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.70e3
  • 9.70e3
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.89e3
  • 9.89e3
54.35
  • 54.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
  • 1.10e4
  • 1.16e4
52.84
  • 52.84
  • 49.11
  • 46.50
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
51.16
  • 51.16
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
48.20
  • 48.20
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.28e4
  • 1.32e4
47.77
  • 47.77
  • 41.02
  • 38.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
37.63
  • 37.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000014680.

Cross-references

EnsemblENSMODG00000014680 (SMO)
HGNCHGNC:11119 (SMO)
Uniprot/SPTREMBLF7E7J3, F7E7J3_MONDO

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