M. domestica Gene: PBX2 - ENSMODG00000014873 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000014873
NamePBX2
Descriptionpre-B-cell leukemia homeobox 2 [Source:HGNC Symbol;Acc:HGNC:8633]
OrganismMonodelphis domestica (opossum)
Synonym(s)g17, hox12, pbx2mhc
Orthologs(s)14 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
534
  • 534
  • 4.38e3
  • 5.52e3
97.54
  • 97.54
  • 79.79
  • 74.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
537
  • 537
97.53
  • 97.53
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
549
  • 549
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
914
  • 914
95.79
  • 95.79
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.21e3
  • 1.21e3
  • 1.35e3
94.40
  • 94.40
  • 93.76
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.32e3
  • 1.32e3
93.92
  • 93.92
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.35e3
  • 1.35e3
  • 1.64e3
  • 2.17e3
93.75
  • 93.75
  • 92.42
  • 90.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.49e3
  • 1.49e3
93.12
  • 93.12
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.56e3
  • 1.56e3
  • 2.14e3
92.82
  • 92.82
  • 90.11
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
2.39e3
  • 2.39e3
88.96
  • 88.96
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
2.45e3
  • 2.45e3
  • 2.85e3
88.70
  • 88.70
  • 86.86
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.58e3
  • 2.58e3
  • 2.59e3
88.11
  • 88.11
  • 88.03
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.98e3
  • 2.98e3
  • 3.26e3
  • 3.84e3
86.24
  • 86.24
  • 84.95
  • 82.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.21e3
  • 3.21e3
  • 4.17e3
  • 4.18e3
85.18
  • 85.18
  • 80.77
  • 80.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.45e3
  • 3.45e3
84.06
  • 84.06
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
3.77e3
  • 3.77e3
82.61
  • 82.61
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.11e3
  • 5.11e3
76.41
  • 76.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.34e3
  • 9.34e3
  • 1.01e4
  • 1.13e4
56.89
  • 56.89
  • 53.38
  • 47.96
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
50.22
  • 50.22
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
39.73
  • 39.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSMODG00000014873.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Metazoa2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000014873.

Cross-references

EnsemblENSMODG00000014873 (PBX2)
HGNCHGNC:8633 (PBX2)
Uniprot/SPTREMBLF6YKT7, F6YKT7_MONDO

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