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M. domestica Gene: TSPAN4 - ENSMODG00000015009 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015009
NameTSPAN4
Descriptiontetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
OrganismMonodelphis domestica (opossum)
Synonym(s)nag-2, tetraspan, tm4sf7, tspan-4
Orthologs(s)14 orthologs
Paralog(s)9 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.72e3
  • 1.72e3
92.06
  • 92.06
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.80e3
  • 1.80e3
91.70
  • 91.70
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.50e3
  • 2.50e3
  • 3.06e3
88.48
  • 88.48
  • 85.86
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
2.73e3
  • 2.73e3
  • 4.02e3
  • 4.83e3
87.41
  • 87.41
  • 81.46
  • 77.69
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
3.24e3
  • 3.24e3
85.05
  • 85.05
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
3.74e3
  • 3.74e3
  • 4.14e3
82.74
  • 82.74
  • 80.90
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.98e3
  • 4.98e3
  • 6.43e3
  • 6.49e3
77.02
  • 77.02
  • 70.32
  • 70.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
5.05e3
  • 5.05e3
  • 6.23e3
  • 7.09e3
76.69
  • 76.69
  • 71.25
  • 67.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
5.47e3
  • 5.47e3
74.73
  • 74.73
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
5.85e3
  • 5.85e3
73.00
  • 73.00
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
6.57e3
  • 6.57e3
69.66
  • 69.66
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.66e3
  • 6.66e3
69.28
  • 69.28
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.26e3
  • 7.26e3
  • 8.07e3
  • 9.16e3
66.47
  • 66.47
  • 62.76
  • 57.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.28e3
  • 7.28e3
66.41
  • 66.41
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.90e3
  • 7.90e3
63.52
  • 63.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.94e3
  • 7.94e3
  • 1.02e4
  • 1.13e4
63.34
  • 63.34
  • 53.06
  • 48.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
8.83e3
  • 8.83e3
59.22
  • 59.22
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
9.19e3
  • 9.19e3
  • 9.43e3
57.59
  • 57.59
  • 56.47
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.05e4
  • 1.05e4
  • 1.07e4
51.35
  • 51.35
  • 50.55
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
50.63
  • 50.63
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.13e4
  • 1.13e4
48.01
  • 48.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression

Orthology information comes from OMA : ENSMODG00000015009.

Paralogs (same species)

Cross-references

EnsemblENSMODG00000015009 (TSPAN4)
HGNCHGNC:11859 (TSPAN4)
Uniprot/SPTREMBLH9H6R1, H9H6R1_MONDO

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