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M. domestica Gene: USE1 - ENSMODG00000015039 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015039
NameUSE1
Descriptionunconventional SNARE in the ER 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:30882]
OrganismMonodelphis domestica (opossum)
Synonym(s)d12, mds032, p31, slt1
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.49e3
  • 4.49e3
  • 6.69e3
  • 9.27e3
79.27
  • 79.27
  • 69.11
  • 57.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
4.74e3
  • 4.74e3
  • 7.30e3
78.11
  • 78.11
  • 66.28
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.88e3
  • 5.88e3
72.88
  • 72.88
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.66e3
  • 6.66e3
  • 9.98e3
69.27
  • 69.27
  • 53.94
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.70e3
  • 6.70e3
  • 8.03e3
69.09
  • 69.09
  • 62.94
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
6.76e3
  • 6.76e3
68.81
  • 68.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.06e3
  • 7.06e3
  • 7.57e3
  • 8.76e3
67.40
  • 67.40
  • 65.05
  • 59.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
7.33e3
  • 7.33e3
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.63e3
  • 7.63e3
  • 7.83e3
  • 8.40e3
64.79
  • 64.79
  • 63.88
  • 61.24
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.71e3
  • 7.71e3
64.40
  • 64.40
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.31e3
  • 8.31e3
61.63
  • 61.63
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
8.64e3
  • 8.64e3
60.13
  • 60.13
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
8.76e3
  • 8.76e3
59.55
  • 59.55
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
8.85e3
  • 8.85e3
  • 9.46e3
  • 9.58e3
59.14
  • 59.14
  • 56.33
  • 55.77
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
8.94e3
  • 8.94e3
  • 9.18e3
  • 9.74e3
58.74
  • 58.74
  • 57.61
  • 55.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.21e3
  • 9.21e3
57.47
  • 57.47
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.57e3
  • 9.57e3
  • 9.60e3
55.81
  • 55.81
  • 55.70
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.67e3
  • 9.67e3
55.36
  • 55.36
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
9.87e3
  • 9.87e3
54.44
  • 54.44
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.88e3
  • 9.88e3
54.38
  • 54.38
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.01e4
  • 1.01e4
53.54
  • 53.54
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.01e4
  • 1.01e4
53.39
  • 53.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species13 genesCompare expression
Tetrapoda13 species14 genesCompare expression
Euteleostomi14 species15 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSMODG00000015039.

Cross-references

EnsemblENSMODG00000015039 (USE1)
HGNCHGNC:30882 (USE1)
Uniprot/SPTREMBLF7G5D4, F7G5D4_MONDO

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