M. domestica Gene: SMAD5 - ENSMODG00000015152 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015152
NameSMAD5
DescriptionSMAD family member 5 [Source:HGNC Symbol;Acc:HGNC:6771]
OrganismMonodelphis domestica (opossum)
Synonym(s)dwfc, jv5-1, madh5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.40e3
  • 2.40e3
  • 3.39e3
88.91
  • 88.91
  • 84.36
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.06e3
  • 3.06e3
85.87
  • 85.87
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
3.47e3
  • 3.47e3
84.00
  • 84.00
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
3.83e3
  • 3.83e3
82.33
  • 82.33
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.90e3
  • 3.90e3
  • 6.39e3
  • 8.70e3
81.98
  • 81.98
  • 70.50
  • 59.84
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.13e3
  • 4.13e3
  • 4.29e3
  • 6.31e3
80.95
  • 80.95
  • 80.22
  • 70.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.26e3
  • 4.26e3
  • 4.66e3
  • 5.73e3
80.35
  • 80.35
  • 78.49
  • 73.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
4.63e3
  • 4.63e3
78.62
  • 78.62
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
4.99e3
  • 4.99e3
  • 6.68e3
76.95
  • 76.95
  • 69.17
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
5.48e3
  • 5.48e3
74.70
  • 74.70
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.71e3
  • 6.71e3
  • 6.83e3
  • 7.00e3
69.01
  • 69.01
  • 68.48
  • 67.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.74e3
  • 6.74e3
68.90
  • 68.90
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.76e3
  • 6.76e3
68.78
  • 68.78
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
6.85e3
  • 6.85e3
  • 6.88e3
68.37
  • 68.37
  • 68.26
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
7.34e3
  • 7.34e3
66.11
  • 66.11
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
7.38e3
  • 7.38e3
  • 8.22e3
65.91
  • 65.91
  • 62.05
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.48e3
  • 7.48e3
  • 8.50e3
  • 8.89e3
65.47
  • 65.47
  • 60.76
  • 58.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.68e3
  • 7.68e3
64.55
  • 64.55
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.37e3
  • 8.37e3
61.38
  • 61.38
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.18e3
  • 9.18e3
57.60
  • 57.60
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.92e3
  • 9.92e3
54.21
  • 54.21
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
53.79
  • 53.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000015152 (SMAD5)
HGNCHGNC:6771 (SMAD5)
Uniprot/SPTREMBLF7CFQ6, F7CFQ6_MONDO

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