M. domestica Gene: SDR42E1 - ENSMODG00000015169 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015169
NameSDR42E1
Descriptionshort chain dehydrogenase/reductase family 42E, member 1 [Source:HGNC Symbol;Acc:HGNC:29834]
OrganismMonodelphis domestica (opossum)
Synonym(s)hspc105

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000018spermatid
  • UBERON:0018241prime adult stage
5.79e3
  • 5.79e3
73.29
  • 73.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
6.70e3
  • 6.70e3
  • 1.02e4
  • 1.19e4
69.08
  • 69.08
  • 53.02
  • 45.11
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
7.49e3
  • 7.49e3
65.42
  • 65.42
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.82e3
  • 7.82e3
63.88
  • 63.88
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
9.92e3
  • 9.92e3
  • 1.28e4
54.22
  • 54.22
  • 40.96
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.00e4
  • 1.00e4
  • 1.37e4
53.66
  • 53.66
  • 36.79
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
  • 1.05e4
  • 1.09e4
52.75
  • 52.75
  • 51.76
  • 49.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
49.02
  • 49.02
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.17e4
  • 1.17e4
45.93
  • 45.93
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
  • 1.20e4
44.83
  • 44.83
  • 44.51
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
42.92
  • 42.92
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
42.70
  • 42.70
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
41.73
  • 41.73
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
  • 1.36e4
  • 1.42e4
39.50
  • 39.50
  • 37.07
  • 34.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
  • 1.50e4
  • 1.51e4
37.66
  • 37.66
  • 30.54
  • 30.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
37.31
  • 37.31
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.38e4
  • 1.38e4
  • 1.39e4
36.11
  • 36.11
  • 35.78
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
35.00
  • 35.00
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
29.54
  • 29.54
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.57e4
  • 1.57e4
27.63
  • 27.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSMODG00000015169 (SDR42E1)
HGNCHGNC:29834 (SDR42E1)
Uniprot/SPTREMBLF7CET2, F7CET2_MONDO

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