M. domestica Gene: DES - ENSMODG00000015180 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015180
NameDES
Descriptiondesmin [Source:HGNC Symbol;Acc:HGNC:2770]
OrganismMonodelphis domestica (opossum)
Synonym(s)cmd1i, csm1, csm2
Orthologs(s)17 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
172
  • 172
99.21
  • 99.21
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
205
  • 205
  • 283
  • 365
99.06
  • 99.06
  • 98.70
  • 98.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
686
  • 686
  • 1.38e3
  • 8.14e3
96.84
  • 96.84
  • 93.65
  • 62.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.16e3
  • 1.16e3
  • 1.27e3
94.63
  • 94.63
  • 94.13
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.43e3
  • 1.43e3
93.39
  • 93.39
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.81e3
  • 1.81e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.91e3
  • 1.91e3
  • 2.47e3
91.19
  • 91.19
  • 88.59
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
5.01e3
  • 5.01e3
76.86
  • 76.86
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
5.67e3
  • 5.67e3
73.83
  • 73.83
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
6.54e3
  • 6.54e3
  • 1.27e4
  • 1.35e4
69.79
  • 69.79
  • 41.37
  • 37.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.57e3
  • 7.57e3
65.05
  • 65.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
8.37e3
  • 8.37e3
  • 8.72e3
  • 1.00e4
61.38
  • 61.38
  • 59.77
  • 53.66
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.62e3
  • 8.62e3
60.22
  • 60.22
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.78e3
  • 8.78e3
  • 1.14e4
59.48
  • 59.48
  • 47.30
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.24e3
  • 9.24e3
57.36
  • 57.36
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
47.07
  • 47.07
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.19e4
  • 1.19e4
44.88
  • 44.88
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.21e4
  • 1.21e4
43.98
  • 43.98
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
42.53
  • 42.53
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
41.30
  • 41.30
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.39e4
  • 1.39e4
35.83
  • 35.83
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.51e4
  • 1.51e4
  • 1.57e4
30.12
  • 30.12
  • 27.38
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000015180.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata3 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000015180.

Cross-references

EnsemblENSMODG00000015180 (DES)
HGNCHGNC:2770 (DES)
Uniprot/SPTREMBLF7BWE5, F7BWE5_MONDO

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