M. domestica Gene: LRRC4 - ENSMODG00000015194 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015194
NameLRRC4
Descriptionleucine rich repeat containing 4 [Source:HGNC Symbol;Acc:HGNC:15586]
OrganismMonodelphis domestica (opossum)
Synonym(s)nag14
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.91e3
  • 1.91e3
91.21
  • 91.21
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
2.30e3
  • 2.30e3
  • 4.16e3
89.39
  • 89.39
  • 80.80
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
2.34e3
  • 2.34e3
  • 4.26e3
  • 9.10e3
89.19
  • 89.19
  • 80.34
  • 57.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
48.80
  • 48.80
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.12e4
  • 1.12e4
48.24
  • 48.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.61e4
47.67
  • 47.67
  • 25.55
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.16e4
  • 1.16e4
46.40
  • 46.40
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.52e4
  • 1.65e4
40.58
  • 40.58
  • 29.79
  • 23.60
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
34.39
  • 34.39
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
33.85
  • 33.85
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
  • 1.49e4
  • 1.67e4
31.82
  • 31.82
  • 31.36
  • 22.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.52e4
  • 1.52e4
  • 1.62e4
  • 1.72e4
29.82
  • 29.82
  • 25.11
  • 20.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.53e4
  • 1.53e4
29.28
  • 29.28
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
1.55e4
  • 1.55e4
28.37
  • 28.37
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.68e4
  • 1.68e4
  • 1.70e4
22.43
  • 22.43
  • 21.40
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSMODG00000015194.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000015194.

Cross-references

EnsemblENSMODG00000015194 (LRRC4)
HGNCHGNC:15586 (LRRC4)
Uniprot/SPTREMBLF7BVS9, F7BVS9_MONDO

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