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M. domestica Gene: TUBA1B - ENSMODG00000015206 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015206
NameTUBA1B
Descriptiontubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]
OrganismMonodelphis domestica (opossum)
Synonym(s)k-alpha-1
Orthologs(s)2 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
18.0
  • 18.0
  • 41.0
99.92
  • 99.92
  • 99.82
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
87.9
  • 87.9
  • 265
  • 386
99.60
  • 99.60
  • 98.78
  • 98.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
172
  • 172
99.21
  • 99.21
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
177
  • 177
99.19
  • 99.19
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
190
  • 190
99.13
  • 99.13
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
196
  • 196
99.10
  • 99.10
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
479
  • 479
97.79
  • 97.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
551
  • 551
  • 647
  • 867
97.46
  • 97.46
  • 97.02
  • 96.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
562
  • 562
  • 685
97.41
  • 97.41
  • 96.84
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
926
  • 926
  • 1.34e3
95.73
  • 95.73
  • 93.80
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
937
  • 937
95.68
  • 95.68
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
948
  • 948
95.63
  • 95.63
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.24e3
  • 1.24e3
  • 2.04e3
  • 2.48e3
94.29
  • 94.29
  • 90.59
  • 88.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.41e3
  • 1.41e3
  • 1.55e3
93.49
  • 93.49
  • 92.86
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.44e3
  • 1.44e3
93.34
  • 93.34
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.57e3
  • 1.57e3
92.78
  • 92.78
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.63e3
  • 1.63e3
92.49
  • 92.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.15e3
  • 2.15e3
  • 2.79e3
  • 2.85e3
90.06
  • 90.06
  • 87.10
  • 86.85
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
2.74e3
  • 2.74e3
87.35
  • 87.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.79e3
  • 2.79e3
  • 3.11e3
  • 3.26e3
87.14
  • 87.14
  • 85.64
  • 84.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.12e3
  • 3.12e3
85.59
  • 85.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species2 genesCompare expression

Orthology information comes from OMA : ENSMODG00000015206.

Paralogs (same species)

Cross-references

EnsemblENSMODG00000015206 (TUBA1B)
HGNCHGNC:18809 (TUBA1B)
Uniprot/SPTREMBLH9H781, H9H781_MONDO

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