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M. domestica Gene: SUDS3 - ENSMODG00000015309 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015309
NameSUDS3
DescriptionSDS3 homolog, SIN3A corepressor complex component [Source:HGNC Symbol;Acc:HGNC:29545]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj00052, sap45, sds3
Orthologs(s)24 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
898
  • 898
  • 2.76e3
  • 3.00e3
95.86
  • 95.86
  • 87.28
  • 86.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
932
  • 932
  • 1.91e3
  • 2.13e3
95.70
  • 95.70
  • 91.17
  • 90.17
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.84e3
  • 1.84e3
91.50
  • 91.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.97e3
  • 1.97e3
  • 2.80e3
  • 4.88e3
90.92
  • 90.92
  • 87.07
  • 77.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.15e3
  • 2.15e3
90.09
  • 90.09
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.18e3
  • 2.18e3
  • 2.34e3
89.95
  • 89.95
  • 89.22
AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
2.26e3
  • 2.26e3
89.57
  • 89.57
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
2.34e3
  • 2.34e3
89.20
  • 89.20
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.36e3
  • 2.36e3
89.13
  • 89.13
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.36e3
  • 2.36e3
  • 2.37e3
  • 2.99e3
89.13
  • 89.13
  • 89.05
  • 86.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.36e3
  • 2.36e3
  • 3.15e3
89.10
  • 89.10
  • 85.47
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
2.50e3
  • 2.50e3
88.47
  • 88.47
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.86e3
  • 2.86e3
86.82
  • 86.82
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
2.88e3
  • 2.88e3
  • 3.00e3
  • 3.62e3
86.72
  • 86.72
  • 86.15
  • 83.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
3.00e3
  • 3.00e3
86.16
  • 86.16
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.00e3
  • 3.00e3
86.16
  • 86.16
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.07e3
  • 3.07e3
85.85
  • 85.85
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.07e3
  • 3.07e3
  • 3.41e3
85.81
  • 85.81
  • 84.27
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.16e3
  • 3.16e3
85.41
  • 85.41
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
4.70e3
  • 4.70e3
78.32
  • 78.32
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
6.34e3
  • 6.34e3
  • 6.77e3
70.74
  • 70.74
  • 68.75
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000015309.

Cross-references

EnsemblENSMODG00000015309 (SUDS3)
HGNCHGNC:29545 (SUDS3)
Uniprot/SPTREMBLF6XZ37, F6XZ37_MONDO

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