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M. domestica Gene: DDX39B - ENSMODG00000015791 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000015791
NameDDX39B
DescriptionDEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:HGNC Symbol;Acc:HGNC:13917]
OrganismMonodelphis domestica (opossum)
Synonym(s)bat1, d6s81e, uap56
Orthologs(s)21 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
310
  • 310
98.57
  • 98.57
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
343
  • 343
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
369
  • 369
  • 382
  • 524
98.30
  • 98.30
  • 98.24
  • 97.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
479
  • 479
  • 831
  • 1.16e3
97.79
  • 97.79
  • 96.17
  • 94.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
505
  • 505
  • 571
97.67
  • 97.67
  • 97.37
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
529
  • 529
97.56
  • 97.56
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
691
  • 691
  • 964
96.81
  • 96.81
  • 95.55
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
715
  • 715
96.71
  • 96.71
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
750
  • 750
96.54
  • 96.54
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
781
  • 781
96.40
  • 96.40
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
808
  • 808
  • 840
96.27
  • 96.27
  • 96.13
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
880
  • 880
95.94
  • 95.94
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
968
  • 968
  • 1.18e3
  • 1.36e3
95.54
  • 95.54
  • 94.55
  • 93.71
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.00e3
  • 1.00e3
95.38
  • 95.38
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.04e3
  • 1.04e3
  • 1.11e3
  • 1.20e3
95.23
  • 95.23
  • 94.87
  • 94.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.10e3
  • 1.10e3
  • 1.49e3
  • 1.72e3
94.94
  • 94.94
  • 93.13
  • 92.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.25e3
  • 1.25e3
  • 1.48e3
94.22
  • 94.22
  • 93.16
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.43e3
  • 1.43e3
93.38
  • 93.38
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.60e3
  • 1.60e3
92.60
  • 92.60
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.79e3
  • 1.79e3
91.76
  • 91.76
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
2.00e3
  • 2.00e3
90.77
  • 90.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Bilateria21 species21 genesCompare expression

Orthology information comes from OMA : ENSMODG00000015791.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Mammalia1 geneCompare expression
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000015791.

Cross-references

EnsemblENSMODG00000015791 (DDX39B)
HGNCHGNC:13917 (DDX39B)
Uniprot/SPTREMBLF7FS41, F7FS41_MONDO

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