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M. domestica Gene: SEPHS1 - ENSMODG00000016864 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000016864
NameSEPHS1
Descriptionselenophosphate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:19685]
OrganismMonodelphis domestica (opossum)
Synonym(s)sps, sps1
Orthologs(s)24 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.76e3
  • 1.76e3
91.87
  • 91.87
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.97e3
  • 1.97e3
90.90
  • 90.90
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.39e3
  • 2.39e3
  • 6.75e3
  • 7.99e3
88.98
  • 88.98
  • 68.85
  • 63.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
3.90e3
  • 3.90e3
  • 4.01e3
81.99
  • 81.99
  • 81.51
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
4.00e3
  • 4.00e3
81.54
  • 81.54
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
4.80e3
  • 4.80e3
  • 5.24e3
77.86
  • 77.86
  • 75.79
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
4.89e3
  • 4.89e3
  • 6.15e3
  • 6.59e3
77.41
  • 77.41
  • 71.62
  • 69.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.07e3
  • 5.07e3
  • 6.89e3
  • 6.95e3
76.60
  • 76.60
  • 68.17
  • 67.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
5.44e3
  • 5.44e3
74.90
  • 74.90
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
5.52e3
  • 5.52e3
  • 6.10e3
  • 6.29e3
74.53
  • 74.53
  • 71.86
  • 70.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.87e3
  • 5.87e3
72.91
  • 72.91
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
6.37e3
  • 6.37e3
70.60
  • 70.60
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.38e3
  • 6.38e3
  • 6.52e3
70.54
  • 70.54
  • 69.91
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.56e3
  • 6.56e3
69.74
  • 69.74
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.65e3
  • 6.65e3
69.30
  • 69.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.67e3
  • 6.67e3
69.20
  • 69.20
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.71e3
  • 6.71e3
  • 7.41e3
69.05
  • 69.05
  • 65.80
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
7.13e3
  • 7.13e3
67.07
  • 67.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.50e3
  • 7.50e3
  • 8.09e3
  • 8.76e3
65.36
  • 65.36
  • 62.67
  • 59.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
7.66e3
  • 7.66e3
64.63
  • 64.63
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.59e3
  • 9.59e3
55.71
  • 55.71
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.84e3
  • 9.84e3
54.58
  • 54.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSMODG00000016864.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000016864.

Cross-references

EnsemblENSMODG00000016864 (SEPHS1)
HGNCHGNC:19685 (SEPHS1)
Uniprot/SPTREMBLF6Y2T3, F6Y2T3_MONDO

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