M. domestica Gene: POPDC3 - ENSMODG00000018033 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000018033
NamePOPDC3
Descriptionpopeye domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17649]
OrganismMonodelphis domestica (opossum)
Synonym(s)ba355m14.1, mgc22671, pop3
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
766
  • 766
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.97e3
  • 1.97e3
  • 2.43e3
  • 3.90e3
90.93
  • 90.93
  • 88.77
  • 81.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
2.35e3
  • 2.35e3
  • 1.18e4
89.15
  • 89.15
  • 45.64
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
8.75e3
  • 8.75e3
  • 1.07e4
  • 1.17e4
59.62
  • 59.62
  • 50.71
  • 46.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.97e3
  • 9.97e3
53.97
  • 53.97
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.07e4
  • 1.07e4
50.53
  • 50.53
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.10e4
  • 1.10e4
49.20
  • 49.20
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.11e4
  • 1.11e4
48.97
  • 48.97
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.12e4
  • 1.12e4
  • 1.39e4
  • 1.49e4
48.52
  • 48.52
  • 35.76
  • 31.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
46.98
  • 46.98
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.15e4
  • 1.15e4
46.92
  • 46.92
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
  • 1.27e4
43.74
  • 43.74
  • 41.56
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.28e4
  • 1.28e4
40.95
  • 40.95
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
39.03
  • 39.03
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.36e4
38.39
  • 38.39
  • 37.22
AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
38.01
  • 38.01
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.40e4
  • 1.40e4
  • 1.57e4
35.54
  • 35.54
  • 27.65
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.48e4
34.72
  • 34.72
  • 31.84
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.64e4
  • 1.64e4
  • 1.73e4
  • 1.78e4
24.40
  • 24.40
  • 20.26
  • 17.81
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
22.24
  • 22.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000018033.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000018033.

Cross-references

EnsemblENSMODG00000018033 (POPDC3)
HGNCHGNC:17649 (POPDC3)
Uniprot/SPTREMBLF6ZWH6, F6ZWH6_MONDO

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