M. domestica Gene: - ENSMODG00000018053 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000018053
Name-
DescriptionTetraspanin [Source:UniProtKB/TrEMBL;Acc:F7GEM3]
OrganismMonodelphis domestica (opossum)
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
144
  • 144
  • 284
99.34
  • 99.34
  • 98.69
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
169
  • 169
  • 1.71e3
99.22
  • 99.22
  • 92.09
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
301
  • 301
98.62
  • 98.62
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
507
  • 507
97.67
  • 97.67
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
542
  • 542
  • 604
97.50
  • 97.50
  • 97.21
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
604
  • 604
  • 1.61e3
  • 2.89e3
97.22
  • 97.22
  • 92.59
  • 86.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
873
  • 873
95.97
  • 95.97
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
898
  • 898
95.86
  • 95.86
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
1.10e3
  • 1.10e3
  • 2.88e3
  • 3.44e3
94.94
  • 94.94
  • 86.70
  • 84.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.80e3
  • 1.80e3
91.71
  • 91.71
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.87e3
  • 1.87e3
  • 2.61e3
91.38
  • 91.38
  • 87.94
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
2.44e3
  • 2.44e3
  • 2.56e3
  • 5.36e3
88.72
  • 88.72
  • 88.19
  • 75.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
2.47e3
  • 2.47e3
88.60
  • 88.60
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
3.12e3
  • 3.12e3
85.61
  • 85.61
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
3.17e3
  • 3.17e3
  • 4.25e3
  • 4.95e3
85.39
  • 85.39
  • 80.39
  • 77.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.25e3
  • 3.25e3
84.99
  • 84.99
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
4.42e3
  • 4.42e3
79.58
  • 79.58
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.55e3
  • 4.55e3
78.99
  • 78.99
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.49e3
  • 5.49e3
74.64
  • 74.64
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
6.16e3
  • 6.16e3
71.54
  • 71.54
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
6.80e3
  • 6.80e3
68.61
  • 68.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
7.78e3
  • 7.78e3
  • 1.05e4
  • 1.36e4
64.07
  • 64.07
  • 51.38
  • 37.37
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000018053.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSMODG00000018053.

Cross-references

EnsemblENSMODG00000018053
Uniprot/SPTREMBLF7GEM3, F7GEM3_MONDO

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