M. domestica Gene: VTN - ENSMODG00000019244 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000019244
NameVTN
Descriptionvitronectin [Source:HGNC Symbol;Acc:HGNC:12724]
OrganismMonodelphis domestica (opossum)
Synonym(s)vn
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
33.8
  • 33.8
99.85
  • 99.85
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
64.0
  • 64.0
  • 67.4
  • 71.0
99.71
  • 99.71
  • 99.69
  • 99.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.45e3
  • 2.45e3
88.69
  • 88.69
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.54e3
  • 2.54e3
  • 5.58e3
88.30
  • 88.30
  • 74.22
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.05e3
  • 4.05e3
81.33
  • 81.33
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
8.07e3
  • 8.07e3
62.76
  • 62.76
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
9.69e3
  • 9.69e3
55.26
  • 55.26
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
52.79
  • 52.79
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.04e4
  • 1.04e4
52.08
  • 52.08
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
51.31
  • 51.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
  • 1.39e4
51.22
  • 51.22
  • 35.66
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.06e4
  • 1.06e4
  • 1.38e4
50.89
  • 50.89
  • 36.18
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
42.30
  • 42.30
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
  • 1.52e4
41.55
  • 41.55
  • 29.81
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
36.27
  • 36.27
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
27.99
  • 27.99
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.88e4
  • 1.88e4
13.11
  • 13.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000019244.

Cross-references

EnsemblENSMODG00000019244 (VTN)
HGNCHGNC:12724 (VTN)
Uniprot/SPTREMBLF6QTH2, F6QTH2_MONDO

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