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M. domestica Gene: RNF180 - ENSMODG00000019621 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000019621
NameRNF180
Descriptionring finger protein 180 [Source:HGNC Symbol;Acc:HGNC:27752]
OrganismMonodelphis domestica (opossum)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
3.41e3
  • 3.41e3
84.28
  • 84.28
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
4.24e3
  • 4.24e3
80.42
  • 80.42
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
4.27e3
  • 4.27e3
80.29
  • 80.29
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
5.64e3
  • 5.64e3
  • 7.26e3
73.97
  • 73.97
  • 66.50
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.19e3
  • 6.19e3
  • 6.42e3
  • 7.71e3
71.44
  • 71.44
  • 70.38
  • 64.39
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.36e3
  • 6.36e3
  • 7.98e3
70.64
  • 70.64
  • 63.16
AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.40e3
  • 7.40e3
  • 1.12e4
65.86
  • 65.86
  • 48.51
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
8.88e3
  • 8.88e3
  • 9.20e3
  • 1.02e4
59.03
  • 59.03
  • 57.54
  • 53.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
9.61e3
  • 9.61e3
  • 9.76e3
  • 1.04e4
55.63
  • 55.63
  • 54.93
  • 52.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
9.62e3
  • 9.62e3
55.57
  • 55.57
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.03e4
  • 1.03e4
52.40
  • 52.40
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.06e4
  • 1.06e4
50.99
  • 50.99
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
50.83
  • 50.83
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
49.57
  • 49.57
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
48.70
  • 48.70
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.12e4
  • 1.12e4
  • 1.17e4
  • 1.33e4
48.39
  • 48.39
  • 46.17
  • 38.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
45.11
  • 45.11
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.33e4
  • 1.33e4
  • 1.46e4
38.63
  • 38.63
  • 32.56
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000019621.

Cross-references

EnsemblENSMODG00000019621 (RNF180)
HGNCHGNC:27752 (RNF180)
Uniprot/SPTREMBLF6XQ71, F6XQ71_MONDO

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