M. domestica Gene: C5orf34 - ENSMODG00000020277 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000020277
NameC5orf34
Descriptionchromosome 5 open reading frame 34 [Source:HGNC Symbol;Acc:HGNC:24738]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj32363
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.87e3
  • 4.87e3
77.50
  • 77.50
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.03e3
  • 5.03e3
76.80
  • 76.80
AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
6.13e3
  • 6.13e3
71.70
  • 71.70
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
6.20e3
  • 6.20e3
  • 6.48e3
71.40
  • 71.40
  • 70.09
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
6.62e3
  • 6.62e3
  • 7.45e3
  • 8.49e3
69.46
  • 69.46
  • 65.62
  • 60.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
7.09e3
  • 7.09e3
67.26
  • 67.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
7.38e3
  • 7.38e3
  • 7.62e3
  • 1.01e4
65.93
  • 65.93
  • 64.84
  • 53.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.86e3
  • 7.86e3
  • 1.03e4
  • 1.23e4
63.70
  • 63.70
  • 52.30
  • 43.36
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
8.17e3
  • 8.17e3
62.26
  • 62.26
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
8.46e3
  • 8.46e3
  • 9.74e3
60.97
  • 60.97
  • 55.05
AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
8.53e3
  • 8.53e3
60.64
  • 60.64
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
8.96e3
  • 8.96e3
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
9.16e3
  • 9.16e3
57.73
  • 57.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
9.29e3
  • 9.29e3
  • 1.07e4
  • 1.14e4
57.13
  • 57.13
  • 50.83
  • 47.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.84e3
  • 9.84e3
54.57
  • 54.57
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
9.87e3
  • 9.87e3
54.42
  • 54.42
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.02e4
  • 1.02e4
  • 1.08e4
  • 1.15e4
53.11
  • 53.11
  • 49.99
  • 46.99
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
50.15
  • 50.15
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.09e4
  • 1.09e4
  • 1.20e4
49.74
  • 49.74
  • 44.67
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.12e4
  • 1.12e4
  • 1.17e4
48.15
  • 48.15
  • 45.99
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
45.55
  • 45.55
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.22e4
  • 1.22e4
43.68
  • 43.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression

Orthology information comes from OMA : ENSMODG00000020277.

Cross-references

EnsemblENSMODG00000020277 (C5orf34)
HGNCHGNC:24738 (C5orf34)
Uniprot/SPTREMBLF7C0T2, F7C0T2_MONDO

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