M. domestica Gene: SLC39A8 - ENSMODG00000020674 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000020674
NameSLC39A8
Descriptionsolute carrier family 39 (zinc transporter), member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
OrganismMonodelphis domestica (opossum)
Synonym(s)bigm103
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
374
  • 374
  • 2.11e3
98.28
  • 98.28
  • 90.26
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.16e3
  • 1.16e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.20e3
  • 3.20e3
  • 3.66e3
  • 4.36e3
85.21
  • 85.21
  • 83.12
  • 79.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.39e3
  • 3.39e3
  • 4.13e3
84.35
  • 84.35
  • 80.95
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
4.50e3
  • 4.50e3
79.21
  • 79.21
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.77e3
  • 4.77e3
77.97
  • 77.97
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.31e3
  • 5.31e3
75.47
  • 75.47
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.71e3
  • 5.71e3
  • 5.96e3
  • 9.31e3
73.62
  • 73.62
  • 72.51
  • 57.02
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.45e3
  • 6.45e3
70.24
  • 70.24
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.61e3
  • 6.61e3
69.48
  • 69.48
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
7.62e3
  • 7.62e3
  • 1.04e4
64.84
  • 64.84
  • 51.90
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.66e3
  • 7.66e3
  • 1.13e4
  • 1.36e4
64.64
  • 64.64
  • 48.05
  • 37.16
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.84e3
  • 7.84e3
63.79
  • 63.79
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
8.19e3
  • 8.19e3
  • 1.05e4
62.21
  • 62.21
  • 51.67
AEIR
  • AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
9.82e3
  • 9.82e3
54.67
  • 54.67
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.89e3
  • 9.89e3
54.34
  • 54.34
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.12e4
  • 1.12e4
48.45
  • 48.45
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.19e4
  • 1.19e4
  • 1.30e4
  • 1.33e4
45.24
  • 45.24
  • 40.00
  • 38.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.23e4
  • 1.23e4
43.06
  • 43.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
  • 1.43e4
  • 1.51e4
39.22
  • 39.22
  • 33.79
  • 30.32
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSMODG00000020674.

Cross-references

EnsemblENSMODG00000020674 (SLC39A8)
HGNCHGNC:20862 (SLC39A8)
Uniprot/SPTREMBLF7DLB3, F7DLB3_MONDO

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