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M. domestica Gene: LRRC59 - ENSMODG00000020901 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000020901
NameLRRC59
Descriptionleucine rich repeat containing 59 [Source:HGNC Symbol;Acc:HGNC:28817]
OrganismMonodelphis domestica (opossum)
Synonym(s)flj21675, pro1855
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
765
  • 765
96.47
  • 96.47
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
979
  • 979
  • 5.77e3
  • 6.51e3
95.48
  • 95.48
  • 73.34
  • 69.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
990
  • 990
95.43
  • 95.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.10e3
  • 1.10e3
  • 1.15e3
  • 1.62e3
94.95
  • 94.95
  • 94.68
  • 92.50
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
1.20e3
  • 1.20e3
94.46
  • 94.46
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.32e3
  • 1.32e3
93.93
  • 93.93
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.50e3
  • 1.50e3
  • 1.83e3
  • 3.23e3
93.08
  • 93.08
  • 91.55
  • 85.08
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.68e3
  • 1.68e3
  • 1.84e3
92.24
  • 92.24
  • 91.50
AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
1.76e3
  • 1.76e3
91.86
  • 91.86
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.91e3
  • 1.91e3
91.18
  • 91.18
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.03e3
  • 2.03e3
  • 2.41e3
  • 3.68e3
90.65
  • 90.65
  • 88.89
  • 83.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
2.41e3
  • 2.41e3
  • 3.33e3
88.90
  • 88.90
  • 84.62
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
3.37e3
  • 3.37e3
  • 3.48e3
84.45
  • 84.45
  • 83.94
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.38e3
  • 3.38e3
84.41
  • 84.41
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
4.62e3
  • 4.62e3
78.67
  • 78.67
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
4.77e3
  • 4.77e3
  • 7.27e3
78.00
  • 78.00
  • 66.44
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
5.41e3
  • 5.41e3
  • 5.75e3
  • 6.15e3
75.01
  • 75.01
  • 73.48
  • 71.60
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
5.72e3
  • 5.72e3
73.59
  • 73.59
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
6.18e3
  • 6.18e3
71.47
  • 71.47
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.69e3
  • 6.69e3
69.13
  • 69.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria14 species15 genesCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSMODG00000020901.

Cross-references

EnsemblENSMODG00000020901 (LRRC59)
HGNCHGNC:28817 (LRRC59)
Uniprot/SPTREMBLH9H7R4, H9H7R4_MONDO

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