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M. domestica Gene: SAMSN1 - ENSMODG00000020950 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000020950
NameSAMSN1
DescriptionSAM domain, SH3 domain and nuclear localization signals 1 [Source:HGNC Symbol;Acc:HGNC:10528]
OrganismMonodelphis domestica (opossum)
Synonym(s)hacs1, nash1, sash2, sh3d6b, sly2
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0000104life cycle
5.46e3
  • 5.46e3
74.78
  • 74.78
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.29e3
  • 9.29e3
57.12
  • 57.12
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
44.20
  • 44.20
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.26e4
  • 1.26e4
  • 1.33e4
41.93
  • 41.93
  • 38.45
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
40.51
  • 40.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.32e4
  • 1.32e4
  • 1.44e4
  • 1.48e4
39.11
  • 39.11
  • 33.31
  • 31.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.35e4
  • 1.35e4
37.71
  • 37.71
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0007222late adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
  • 1.36e4
  • 1.45e4
37.68
  • 37.68
  • 37.03
  • 32.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.36e4
  • 1.36e4
  • 1.41e4
  • 1.65e4
37.20
  • 37.20
  • 35.05
  • 23.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
  • 1.70e4
  • 1.81e4
34.53
  • 34.53
  • 21.60
  • 16.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
  • 1.47e4
34.35
  • 34.35
  • 32.16
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.42e4
  • 1.42e4
34.31
  • 34.31
AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.46e4
  • 1.46e4
32.71
  • 32.71
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.49e4
  • 1.49e4
31.11
  • 31.11
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
30.75
  • 30.75
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.52e4
  • 1.52e4
29.62
  • 29.62
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.54e4
  • 1.54e4
29.04
  • 29.04
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.55e4
  • 1.55e4
28.43
  • 28.43
AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.58e4
  • 1.58e4
26.91
  • 26.91
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000020950.

Cross-references

EnsemblENSMODG00000020950 (SAMSN1)
HGNCHGNC:10528 (SAMSN1)
Uniprot/SPTREMBLF6SPA7, F6SPA7_MONDO

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