M. domestica Gene: AP1S3 - ENSMODG00000021198 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000021198
NameAP1S3
Descriptionadaptor related protein complex 1 sigma 3 subunit [Source:HGNC Symbol;Acc:HGNC:18971]
OrganismMonodelphis domestica (opossum)
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001295endometrium
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
581
  • 581
  • 1.11e3
97.32
  • 97.32
  • 94.90
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
630
  • 630
97.10
  • 97.10
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
1.31e3
  • 1.31e3
93.97
  • 93.97
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.95e3
  • 1.95e3
  • 2.19e3
90.98
  • 90.98
  • 89.89
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
2.79e3
  • 2.79e3
  • 2.90e3
  • 3.48e3
87.10
  • 87.10
  • 86.62
  • 83.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
4.90e3
  • 4.90e3
  • 7.72e3
  • 1.08e4
77.39
  • 77.39
  • 64.35
  • 50.06
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
5.35e3
  • 5.35e3
75.29
  • 75.29
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.78e3
  • 5.78e3
73.30
  • 73.30
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
7.79e3
  • 7.79e3
64.02
  • 64.02
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.96e3
  • 7.96e3
63.24
  • 63.24
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.25e3
  • 8.25e3
61.91
  • 61.91
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
8.59e3
  • 8.59e3
  • 1.08e4
  • 1.21e4
60.35
  • 60.35
  • 50.11
  • 44.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003278skeleton of lower jaw
  • UBERON:0018685nursing stage
9.34e3
  • 9.34e3
56.90
  • 56.90
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
9.44e3
  • 9.44e3
56.41
  • 56.41
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
1.02e4
  • 1.02e4
52.74
  • 52.74
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0000104life cycle
1.03e4
  • 1.03e4
52.26
  • 52.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
  • 1.19e4
  • 1.24e4
50.54
  • 50.54
  • 44.88
  • 42.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.26e4
49.12
  • 49.12
  • 42.02
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.51e4
41.67
  • 41.67
  • 30.49
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0018685nursing stage
  • UBERON:0007221neonate stage
1.28e4
  • 1.28e4
  • 1.48e4
41.01
  • 41.01
  • 31.53
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
35.06
  • 35.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Mammalia14 species14 genesCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSMODG00000021198.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000021198.

Cross-references

EnsemblENSMODG00000021198 (AP1S3)
HGNCHGNC:18971 (AP1S3)
Uniprot/SPTREMBLF6XE46, F6XE46_MONDO

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