We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

M. domestica Gene: CCDC39 - ENSMODG00000021295 - Monodelphis domestica (opossum)

General information

Ensembl IDENSMODG00000021295
NameCCDC39
Descriptioncoiled-coil domain containing 39 [Source:HGNC Symbol;Acc:HGNC:25244]
OrganismMonodelphis domestica (opossum)
Synonym(s)cild14, dkfzp434a128, fap59
Orthologs(s)23 orthologs
Paralog(s)280 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0018241prime adult stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.86e3
  • 1.86e3
  • 3.74e3
  • 6.92e3
91.41
  • 91.41
  • 82.73
  • 68.05
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0007222late adult stage
  • UBERON:0018241prime adult stage
2.58e3
  • 2.58e3
  • 6.23e3
88.09
  • 88.09
  • 71.24
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
3.99e3
  • 3.99e3
  • 5.87e3
  • 6.36e3
81.60
  • 81.60
  • 72.91
  • 70.65
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0018241prime adult stage
5.54e3
  • 5.54e3
74.41
  • 74.41
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0018241prime adult stage
8.46e3
  • 8.46e3
60.96
  • 60.96
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.11e3
  • 9.11e3
57.94
  • 57.94
AEIR
  • AEIR
UBERON:0001295endometrium
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018241prime adult stage
9.79e3
  • 9.79e3
  • 1.15e4
54.82
  • 54.82
  • 46.88
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
  • 1.05e4
  • 1.32e4
52.83
  • 52.83
  • 51.39
  • 39.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000459uterine wall
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
50.24
  • 50.24
AEIR
  • AEIR
UBERON:0002240spinal cord
  • UBERON:0007221neonate stage
  • UBERON:0018685nursing stage
1.09e4
  • 1.09e4
  • 1.19e4
49.89
  • 49.89
  • 44.91
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
46.28
  • 46.28
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.19e4
  • 1.19e4
45.22
  • 45.22
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.20e4
  • 1.20e4
44.47
  • 44.47
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.24e4
  • 1.24e4
42.65
  • 42.65
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0007222late adult stage
1.30e4
  • 1.30e4
  • 1.32e4
  • 1.35e4
39.80
  • 39.80
  • 38.93
  • 37.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
36.44
  • 36.44
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
36.33
  • 36.33
AEIR
  • AEIR
UBERON:0005631extraembryonic membrane
  • UBERON:0000068embryo stage
1.39e4
  • 1.39e4
35.74
  • 35.74
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0007222late adult stage
1.41e4
  • 1.41e4
  • 1.51e4
35.04
  • 35.04
  • 30.31
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
33.17
  • 33.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Theria13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSMODG00000021295.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota280 genesCompare expression

Paralogy information comes from OMA : ENSMODG00000021295.

Cross-references

EnsemblENSMODG00000021295 (CCDC39)
HGNCHGNC:25244 (CCDC39)
Uniprot/SPTREMBLF7G3V1, F7G3V1_MONDO

Do not show this banner again