M. musculus Gene: Rab5b - ENSMUSG00000000711 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000000711
NameRab5b
DescriptionRAB5B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105938]
OrganismMus musculus (mouse)
Synonym(s)c030027m18rik, p35239, p35277

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.29e3
  • 1.29e3
96.86626
  • 96.86626
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
1.46e3
  • 1.46e3
  • 1.21e4
96.45094
  • 96.45094
  • 70.57848
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
  • 1.75e3
96.33109
  • 96.33109
  • 95.74765
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000451 week (mouse)
1.58e3
  • 1.58e3
  • 2.61e3
  • 5.35e3
  • 1.70e4
  • 1.98e4
96.14625
  • 96.14625
  • 93.64303
  • 86.95419
  • 58.67493
  • 51.82260
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.97e3
  • 1.97e3
  • 4.66e3
  • 1.77e4
95.20356
  • 95.20356
  • 88.63409
  • 56.79746
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.97e3
  • 1.97e3
  • 2.18e3
  • 2.05e4
95.20293
  • 95.20293
  • 94.69869
  • 49.95247
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
2.05e3
  • 2.05e3
94.99817
  • 94.99817
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
  • 2.45e3
94.96670
  • 94.96670
  • 94.03916
AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.09e3
  • 2.09e3
94.90555
  • 94.90555
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
2.11e3
  • 2.11e3
94.86167
  • 94.86167
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:000005511 weeks (mouse)
2.19e3
  • 2.19e3
  • 2.19e3
  • 3.72e3
94.67217
  • 94.67217
  • 94.65309
  • 90.92505
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
  • 4.00e3
  • 9.77e3
  • 1.47e4
  • 2.05e4
94.63972
  • 94.63972
  • 90.25960
  • 76.17782
  • 64.07700
  • 49.95003
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
  • 4.32e3
94.54087
  • 94.54087
  • 89.47346
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.63e3
  • 2.63e3
  • 2.82e3
93.58245
  • 93.58245
  • 93.12241
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
3.14e3
  • 3.14e3
  • 3.34e3
92.35101
  • 92.35101
  • 91.86932
AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
3.19e3
  • 3.19e3
92.23651
  • 92.23651
AEIR
  • AEIR
UBERON:0002370thymus
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000462 weeks (mouse)
3.43e3
  • 3.43e3
  • 1.98e4
91.63661
  • 91.63661
  • 51.63376
AEIR
  • AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
3.47e3
  • 3.47e3
91.55393
  • 91.55393
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.98e3
  • 3.98e3
90.30894
  • 90.30894
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.70e3
  • 5.70e3
86.10983
  • 86.10983
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
6.53e3
  • 6.53e3
  • 1.69e4
84.08792
  • 84.08792
  • 58.80890
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
6.55e3
  • 6.55e3
  • 9.49e3
84.04217
  • 84.04217
  • 76.87264
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0000112sexually immature stage
6.84e3
  • 6.84e3
83.32968
  • 83.32968
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0000112sexually immature stage
7.33e3
  • 7.33e3
82.13921
  • 82.13921
AEIR
  • AEIR
UBERON:0002360meninx
  • UBERON:0000112sexually immature stage
7.46e3
  • 7.46e3
81.81575
  • 81.81575
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0007221neonate stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.82e3
  • 7.82e3
  • 8.45e3
  • 2.05e4
80.95110
  • 80.95110
  • 79.40568
  • 49.93175
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0000112sexually immature stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
8.21e3
  • 8.21e3
  • 1.42e4
  • 1.78e4
79.99756
  • 79.99756
  • 65.37609
  • 56.63742
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0000112sexually immature stage
1.03e4
  • 1.03e4
74.99269
  • 74.99269
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000032Theiler stage 23 (mouse)
1.17e4
  • 1.17e4
71.42613
  • 71.42613
AEIR
  • AEIR
UBERON:0002240spinal cord
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.18e4
  • 1.18e4
  • 1.40e4
  • 1.80e4
71.23632
  • 71.23632
  • 65.78415
  • 56.02769
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001950neocortex
  • MmusDv:0000032Theiler stage 23 (mouse)
1.28e4
  • 1.28e4
68.74635
  • 68.74635
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000451 week (mouse)
1.33e4
  • 1.33e4
  • 1.37e4
  • 2.05e4
67.49434
  • 67.49434
  • 66.66423
  • 49.99269
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006241future spinal cord
  • MmusDv:0000026Theiler stage 19 (mouse)
1.42e4
  • 1.42e4
65.37609
  • 65.37609
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:0000026Theiler stage 19 (mouse)
1.48e4
  • 1.48e4
63.87549
  • 63.87549
AEIR
  • AEIR
UBERON:0001894diencephalon
  • MmusDv:0000026Theiler stage 19 (mouse)
1.54e4
  • 1.54e4
62.48780
  • 62.48780
AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.54e4
  • 1.54e4
  • 1.89e4
62.48780
  • 62.48780
  • 53.90715
AEIR
  • AEIR
  • AEIR
UBERON:0016887entire extraembryonic component
  • UBERON:0000110neurula stage
1.58e4
  • 1.58e4
61.51277
  • 61.51277
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000108blastula stage
1.66e4
  • 1.66e4
  • 1.96e4
  • 2.05e4
59.43878
  • 59.43878
  • 52.12450
  • 49.95247
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009953post-embryonic organism
  • UBERON:0000104life cycle
1.86e4
  • 1.86e4
54.74118
  • 54.74118
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

CCDSCCDS24287 (CCDS24287.1)
EMBLAC117232, AK081251, BC137574, BC137575, CH466578, M79311, X84239
EnsemblENSMUSG00000000711 (Rab5b)
MGIMGI:105938 (Rab5b)
Uniprot/SPTREMBLB2RPS1, B2RPS1_MOUSE
Uniprot/SWISSPROTP61021, RAB5B_MOUSE

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