M. musculus Gene: Rab5b - ENSMUSG00000000711 - Mus musculus (mouse)

General information

Ensembl IDENSMUSG00000000711
NameRab5b
DescriptionRAB5B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105938]
OrganismMus musculus (mouse)
Synonym(s)c030027m18rik, p35239, p35277

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000945stomach
  • UBERON:0000113post-juvenile adult stage
744
  • 744
98.20654
  • 98.20654
AEIR
  • AEIR
CL:0000094granulocyte
  • MmusDv:00000622 month-old stage (mouse)
860
  • 860
97.92612
  • 97.92612
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.29e3
  • 1.29e3
96.89606
  • 96.89606
AEIR
  • AEIR
CL:2000089dentate gyrus of hippocampal formation granule cell
  • MmusDv:0000061early adult stage
1.38e3
  • 1.38e3
96.67277
  • 96.67277
AEIR
  • AEIR
UBERON:0000956cerebral cortex
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
1.46e3
  • 1.46e3
  • 1.22e4
96.48479
  • 96.48479
  • 70.57859
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
1.51e3
  • 1.51e3
  • 1.75e3
96.36606
  • 96.36606
  • 95.78790
AEIR
  • AEIR
  • AEIR
UBERON:0001377quadriceps femoris
  • UBERON:0000113post-juvenile adult stage
1.52e3
  • 1.52e3
96.32183
  • 96.32183
AEIR
  • AEIR
UBERON:0004252hindlimb stylopod muscle
  • UBERON:0000104life cycle
1.53e3
  • 1.53e3
96.30502
  • 96.30502
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • MmusDv:00000633 month-old stage (mouse)
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.57e3
  • 1.57e3
  • 1.59e3
  • 1.97e3
  • 4.71e3
  • 1.79e4
96.21704
  • 96.21704
  • 96.16946
  • 95.24940
  • 88.63411
  • 56.79766
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000451 week (mouse)
1.58e3
  • 1.58e3
  • 2.61e3
  • 5.40e3
  • 1.71e4
  • 2.00e4
96.18300
  • 96.18300
  • 93.70360
  • 86.95420
  • 58.67513
  • 51.82289
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001833lip
  • MmusDv:0000061early adult stage
1.94e3
  • 1.94e3
95.32001
  • 95.32001
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.97e3
  • 1.97e3
  • 2.19e3
  • 6.11e3
  • 2.07e4
95.24867
  • 95.24867
  • 94.72603
  • 85.24867
  • 49.95292
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002436primary visual cortex
  • UBERON:0000104life cycle
1.99e3
  • 1.99e3
95.20374
  • 95.20374
AEIR
  • AEIR
UBERON:0002129cerebellar cortex
  • UBERON:0000104life cycle
2.04e3
  • 2.04e3
95.08334
  • 95.08334
AEIR
  • AEIR
CL:0002476bone marrow macrophage
  • MmusDv:00000528 weeks (mouse)
2.05e3
  • 2.05e3
95.04587
  • 95.04587
AEIR
  • AEIR
UBERON:0000948heart
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
  • 2.22e3
  • 2.44e3
95.01451
  • 95.01451
  • 94.64751
  • 94.11062
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001348brown adipose tissue
  • MmusDv:00000695 month-old stage (mouse)
2.09e3
  • 2.09e3
94.95413
  • 94.95413
AEIR
  • AEIR
CL:0000057fibroblast
  • MmusDv:00000528 weeks (mouse)
2.11e3
  • 2.11e3
94.91067
  • 94.91067
AEIR
  • AEIR
UBERON:0002661superior frontal gyrus
  • UBERON:0000104life cycle
2.11e3
  • 2.11e3
94.89628
  • 94.89628
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
  • MmusDv:00000633 month-old stage (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • UBERON:0000104life cycle
2.12e3
  • 2.12e3
  • 4.00e3
  • 4.26e3
  • 9.87e3
  • 1.49e4
  • 2.07e4
94.87342
  • 94.87342
  • 90.35249
  • 89.72718
  • 76.17793
  • 64.07723
  • 49.95051
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001225cortex of kidney
  • UBERON:0000104life cycle
2.20e3
  • 2.20e3
94.69529
  • 94.69529
AEIR
  • AEIR
UBERON:0000992female gonad
  • MmusDv:00000644 month-old stage (mouse)
  • UBERON:0000113post-juvenile adult stage
2.24e3
  • 2.24e3
  • 4.32e3
94.59293
  • 94.59293
  • 89.57383
AEIR
  • AEIR
  • AEIR
UBERON:0001043esophagus
  • UBERON:0000113post-juvenile adult stage
2.30e3
  • 2.30e3
94.43819
  • 94.43819
AEIR
  • AEIR
UBERON:0002107liver
  • MmusDv:00000622 month-old stage (mouse)
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000776 month-old stage (mouse)
  • MmusDv:000005511 weeks (mouse)
2.31e3
  • 2.31e3
  • 2.37e3
  • 2.38e3
  • 2.50e3
  • 3.62e3
  • 3.72e3
94.42286
  • 94.42286
  • 94.28054
  • 94.25567
  • 93.97513
  • 91.26509
  • 91.01159
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • MmusDv:0000061early adult stage
2.39e3
  • 2.39e3
94.22871
  • 94.22871
AEIR
  • AEIR
UBERON:0004023ganglionic eminence
  • MmusDv:0000029Theiler stage 22 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
2.44e3
  • 2.44e3
  • 1.18e4
94.11183
  • 94.11183
  • 71.42615
AEIR
  • AEIR
  • AEIR
UBERON:0003902retinal neural layer
  • MmusDv:00000622 month-old stage (mouse)
2.48e3
  • 2.48e3
94.02187
  • 94.02187
AEIR
  • AEIR
UBERON:0000014zone of skin
  • MmusDv:0000076aged adult stage (mouse)
  • MmusDv:00000622 month-old stage (mouse)
2.63e3
  • 2.63e3
  • 2.82e3
93.64365
  • 93.64365
  • 93.18798
AEIR
  • AEIR
  • AEIR
UBERON:0005876undifferentiated genital tubercle
  • MmusDv:0000028Theiler stage 21 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
2.68e3
  • 2.68e3
  • 3.15e3
93.53498
  • 93.53498
  • 92.40690
AEIR
  • AEIR
  • AEIR
UBERON:0005343cortical plate
  • MmusDv:0000029Theiler stage 22 (mouse)
2.70e3
  • 2.70e3
93.48901
  • 93.48901
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • MmusDv:00000451 week (mouse)
  • MmusDv:00001134-7 days (mouse)
  • UBERON:0007221neonate stage
  • MmusDv:0000035Theiler stage 26 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
2.74e3
  • 2.74e3
  • 2.91e3
  • 2.96e3
  • 3.20e3
  • 3.98e3
93.39261
  • 93.39261
  • 92.98182
  • 92.86714
  • 92.27760
  • 90.39015
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001987placenta
  • UBERON:0000113post-juvenile adult stage
2.99e3
  • 2.99e3
92.78798
  • 92.78798
AEIR
  • AEIR
UBERON:0002370thymus
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:00000528 weeks (mouse)
  • MmusDv:00000462 weeks (mouse)
3.12e3
  • 3.12e3
  • 3.43e3
  • 2.00e4
92.45833
  • 92.45833
  • 91.71598
  • 51.63407
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • MmusDv:00000528 weeks (mouse)
  • UBERON:0000113post-juvenile adult stage
3.14e3
  • 3.14e3
  • 3.34e3
92.42397
  • 92.42397
  • 91.94686
AEIR
  • AEIR
  • AEIR
UBERON:0003053ventricular zone
  • MmusDv:0000029Theiler stage 22 (mouse)
3.15e3
  • 3.15e3
92.39611
  • 92.39611
AEIR
  • AEIR
UBERON:0004364ectoplacental cone
  • MmusDv:0000019Theiler stage 12 (mouse)
3.18e3
  • 3.18e3
92.33056
  • 92.33056
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
92.03658
  • 92.03658
AEIR
  • AEIR
UBERON:0002115jejunum
  • UBERON:0000113post-juvenile adult stage
3.36e3
  • 3.36e3
91.88296
  • 91.88296
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0000113post-juvenile adult stage
3.36e3
  • 3.36e3
91.87994
  • 91.87994
AEIR
  • AEIR
UBERON:0000160intestine
  • MmusDv:0000027Theiler stage 20 (mouse)
3.38e3
  • 3.38e3
91.85017
  • 91.85017
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • MmusDv:0000022Theiler stage 15 (mouse)
3.38e3
  • 3.38e3
91.84483
  • 91.84483
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0000113post-juvenile adult stage
3.44e3
  • 3.44e3
91.68670
  • 91.68670
AEIR
  • AEIR
CL:0002322embryonic stem cell
  • UBERON:0000106zygote stage
3.47e3
  • 3.47e3
91.63448
  • 91.63448
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • MmusDv:0000022Theiler stage 15 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000024Theiler stage 17 (mouse)
3.82e3
  • 3.82e3
  • 3.98e3
  • 4.54e3
  • 6.10e3
90.76823
  • 90.76823
  • 90.39363
  • 89.04124
  • 85.28467
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • MmusDv:0000024Theiler stage 17 (mouse)
  • MmusDv:0000023Theiler stage 16 (mouse)
  • MmusDv:0000026Theiler stage 19 (mouse)
3.97e3
  • 3.97e3
  • 4.15e3
  • 4.16e3
90.42711
  • 90.42711
  • 89.97697
  • 89.95705
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001264pancreas
  • UBERON:0000113post-juvenile adult stage
5.25e3
  • 5.25e3
87.31700
  • 87.31700
AEIR
  • AEIR
CL:0000017spermatocyte
  • UBERON:0000113post-juvenile adult stage
5.26e3
  • 5.26e3
87.29841
  • 87.29841
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0000112sexually immature stage
5.75e3
  • 5.75e3
86.10983
  • 86.10983
AEIR
  • AEIR
UBERON:0002532epiblast (generic)
  • MmusDv:0000015Theiler stage 10 (mouse)
5.84e3
  • 5.84e3
85.89645
  • 85.89645
AEIR
  • AEIR
UBERON:0000473testis
  • MmusDv:0000061early adult stage
  • UBERON:0000113post-juvenile adult stage
  • MmusDv:000005511 weeks (mouse)
6.33e3
  • 6.33e3
  • 6.55e3
  • 9.49e3
84.71869
  • 84.71869
  • 84.19370
  • 77.09319
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000654primary oocyte
  • UBERON:0000104life cycle
6.40e3
  • 6.40e3
84.54015
  • 84.54015
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
6.59e3
  • 6.59e3
  • 1.71e4
84.08795
  • 84.08795
  • 58.80905
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • MmusDv:0000061early adult stage
6.62e3
  • 6.62e3
84.01738
  • 84.01738
AEIR
  • AEIR
CL:0000365zygote
  • UBERON:0000106zygote stage
6.67e3
  • 6.67e3
83.88972
  • 83.88972
AEIR
  • AEIR
CL:0000655secondary oocyte
  • UBERON:0000104life cycle
6.79e3
  • 6.79e3
83.60111
  • 83.60111
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0000112sexually immature stage
6.91e3
  • 6.91e3
83.32972
  • 83.32972
AEIR
  • AEIR
CL:0000018spermatid
  • UBERON:0000113post-juvenile adult stage
7.40e3
  • 7.40e3
82.14872
  • 82.14872
AEIR
  • AEIR
UBERON:0001886choroid plexus
  • UBERON:0000112sexually immature stage
7.40e3
  • 7.40e3
82.13923
  • 82.13923
AEIR
  • AEIR
UBERON:0002360meninx
  • UBERON:0000112sexually immature stage
7.53e3
  • 7.53e3
81.81577
  • 81.81577
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0007221neonate stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
7.89e3
  • 7.89e3
  • 8.53e3
  • 2.07e4
80.95111
  • 80.95111
  • 79.40572
  • 49.93240
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • UBERON:0000112sexually immature stage
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
8.29e3
  • 8.29e3
  • 1.43e4
  • 1.80e4
79.99759
  • 79.99759
  • 65.37617
  • 56.63769
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0000112sexually immature stage
1.04e4
  • 1.04e4
74.99276
  • 74.99276
AEIR
  • AEIR
UBERON:0002240spinal cord
  • MmusDv:0000027Theiler stage 20 (mouse)
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
1.19e4
  • 1.19e4
  • 1.42e4
  • 1.82e4
71.23646
  • 71.23646
  • 65.78421
  • 56.02801
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001950neocortex
  • MmusDv:0000032Theiler stage 23 (mouse)
1.29e4
  • 1.29e4
68.74638
  • 68.74638
AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • UBERON:0000112sexually immature stage
  • MmusDv:0000032Theiler stage 23 (mouse)
  • MmusDv:00000451 week (mouse)
1.35e4
  • 1.35e4
  • 1.38e4
  • 2.07e4
67.49437
  • 67.49437
  • 66.66424
  • 49.99276
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006241future spinal cord
  • MmusDv:0000026Theiler stage 19 (mouse)
1.43e4
  • 1.43e4
65.37617
  • 65.37617
AEIR
  • AEIR
UBERON:0001893telencephalon
  • MmusDv:0000026Theiler stage 19 (mouse)
1.50e4
  • 1.50e4
63.87562
  • 63.87562
AEIR
  • AEIR
UBERON:0001894diencephalon
  • MmusDv:0000026Theiler stage 19 (mouse)
1.55e4
  • 1.55e4
62.48793
  • 62.48793
AEIR
  • AEIR
UBERON:0002028hindbrain
  • MmusDv:0000026Theiler stage 19 (mouse)
  • MmusDv:0000032Theiler stage 23 (mouse)
1.55e4
  • 1.55e4
  • 1.91e4
62.48793
  • 62.48793
  • 53.90753
AEIR
  • AEIR
  • AEIR
UBERON:0016887entire extraembryonic component
  • UBERON:0000110neurula stage
1.59e4
  • 1.59e4
61.51301
  • 61.51301
AEIR
  • AEIR
UBERON:0000922embryo
  • MmusDv:0000027Theiler stage 20 (mouse)
  • MmusDv:0000034Theiler stage 25 (mouse)
  • UBERON:0000108blastula stage
1.68e4
  • 1.68e4
  • 1.98e4
  • 2.07e4
59.43921
  • 59.43921
  • 52.12545
  • 49.95292
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009953post-embryonic organism
  • UBERON:0000104life cycle
1.87e4
  • 1.87e4
54.74138
  • 54.74138
AEIR
  • AEIR
UBERON:0000165mouth
  • UBERON:0000068embryo stage
1.99e4
  • 1.99e4
52.05799
  • 52.05799
AEIR
  • AEIR
UBERON:0002101limb
  • UBERON:0000068embryo stage
2.07e4
  • 2.07e4
49.96016
  • 49.96016
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: MGI
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: MGI
  • RNA-Seq data: GEO

Cross-references

CCDSCCDS24287 (CCDS24287.1)
EMBLAC117232, AK081251, BC137574, BC137575, CH466578, M79311, X84239
EnsemblENSMUSG00000000711 (Rab5b)
MGIMGI:105938 (Rab5b)
Uniprot/SPTREMBLB2RPS1, B2RPS1_MOUSE
Uniprot/SWISSPROTP61021, RAB5B_MOUSE

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